Sequence 1: | NP_001247399.1 | Gene: | heph / 48571 | FlyBaseID: | FBgn0011224 | Length: | 898 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001116126.1 | Gene: | ptbp1b / 321220 | ZFINID: | ZDB-GENE-030131-9796 | Length: | 564 | Species: | Danio rerio |
Alignment Length: | 634 | Identity: | 300/634 - (47%) |
---|---|---|---|
Similarity: | 388/634 - (61%) | Gaps: | 110/634 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 299 TSLHLSSPKKVRIDEQYIYKLNYLRGSDELLSQAA----VMAPASDNNNQDLATKKAKLEPGTVL 359
Fly 360 AGGI---AKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVS 421
Fly 422 CYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANS 486
Fly 487 SSDSNSAMGILQNTSAVNAG----GNTNAAG--GPNTVLRVIVESLMYPVSLDILHQIFQRYGKV 545
Fly 546 LKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDF 610
Fly 611 TNPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRPSLSVNGL----GAPGVL------------ 659
Fly 660 PPFAL---GLGTPLTGGYNNALPNLA--AFSLANSGALQTTAPAMRGYSNVLLVSNLNEEMVTPD 719
Fly 720 ALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLP 784
Fly 785 KEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVK 849
Fly 850 AFKFFPKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKSNI 898 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
heph | NP_001247399.1 | hnRNP-L_PTB | 366..898 | CDD:273733 | 280/558 (50%) |
RRM1_PTBP1_like | 368..448 | CDD:241132 | 44/79 (56%) | ||
RRM2_PTBP1_like | 516..611 | CDD:241137 | 70/94 (74%) | ||
RRM3_PTBP1_like | 705..778 | CDD:240869 | 46/72 (64%) | ||
RRM4_PTBP1_like | 822..897 | CDD:240871 | 49/74 (66%) | ||
ptbp1b | NP_001116126.1 | hnRNP-L_PTB | 69..564 | CDD:273733 | 280/558 (50%) |
RRM_SF | 71..151 | CDD:302621 | 44/79 (56%) | ||
RRM2_PTBP1_like | 188..283 | CDD:241137 | 70/94 (74%) | ||
RRM_SF | 371..463 | CDD:302621 | 57/91 (63%) | ||
RRM_SF | 484..564 | CDD:302621 | 53/79 (67%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 140 | 1.000 | Domainoid score | I4697 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1190 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H49188 | |
Inparanoid | 1 | 1.050 | 527 | 1.000 | Inparanoid score | I1195 |
OMA | 1 | 1.010 | - | - | QHG58575 | |
OrthoDB | 1 | 1.010 | - | - | D1545178at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001151 | |
OrthoInspector | 1 | 1.000 | - | - | otm25002 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101075 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15592 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X703 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.840 |