DRSC/TRiP Functional Genomics Resources

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Protein Alignment heph and Ptbp2

DIOPT Version :10

Sequence 1:NP_001247399.1 Gene:heph / 48571 FlyBaseID:FBgn0011224 Length:898 Species:Drosophila melanogaster
Sequence 2:XP_006233298.1 Gene:Ptbp2 / 310820 RGDID:1359267 Length:537 Species:Rattus norvegicus


Alignment Length:595 Identity:297/595 - (49%)
Similarity:376/595 - (63%) Gaps:90/595 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 RGSDELLSQAAVMAPASD--------NNNQDLATKKAKLEPGTVLAGGIAKASKVIHLRNIPNES 379
            ||||||||.:.:.:|.|:        |.|.   :||.|.|  ..:.|.   .|:|:|:|.:|.|.
  Rat    14 RGSDELLSGSVLSSPNSNMSGMVVTANGND---SKKFKGE--DKMDGA---PSRVLHIRKLPGEV 70

  Fly   380 GEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRE 444
            .|.:|||||:|||:|||:|:||||||||:|:|.|.:|.:||:.|:...|.:|.:.:|:|:|||:|
  Rat    71 TETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKE 135

  Fly   445 LKTDQGHNN------STAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAV 503
            ||||...|.      ....:..:..:|.||:.:..||...|.|                      
  Rat   136 LKTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS---------------------- 178

  Fly   504 NAGGNTNAAGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANS 568
                         .|||:|::::.|||:||:|||||.::|.||||:||||||.||||:||.|..:
  Rat   179 -------------PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVN 230

  Fly   569 AQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP--PGEPGVDIMPTAGGL 631
            ||.||..||||||||.|||||||.|||..||||||||||||:|.|.||  .|:|.:|  |.    
  Rat   231 AQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALD--PA---- 289

  Fly   632 MNTNDLLLIAARQRPSLSVNGL---GAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQ 693
                    |||......|:.||   ..||.|.|.              |:||.||.:.|.:....
  Rat   290 --------IAAAFAKETSLLGLPVAAVPGALSPL--------------AIPNAAAAAAAAAAGRV 332

  Fly   694 TTAPAMRGYSNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAM 758
            .......|.:.||||||||||||||.:|||||||||||||||||||||||||||||:..|:.|||
  Rat   333 GMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAM 397

  Fly   759 SHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATL 823
            :||:..:::||.|||..||||.||||:||..|.|||:|:..:||||||||||||:|||:||||||
  Rat   398 NHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATL 462

  Fly   824 HLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHNHQLSESNH 888
            ||||||.|.:|:|::..|.:....|||||||.:|.||||||:.:||||:.|||.:||:.|.|::|
  Rat   463 HLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHH 527

  Fly   889 LRVSFSKSNI 898
            ||||||||.|
  Rat   528 LRVSFSKSTI 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hephNP_001247399.1 hnRNP-L_PTB 366..898 CDD:273733 279/542 (51%)
Ptbp2XP_006233298.1 hnRNP-L_PTB 57..537 CDD:273733 279/542 (51%)

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