Sequence 1: | NP_001247399.1 | Gene: | heph / 48571 | FlyBaseID: | FBgn0011224 | Length: | 898 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001070831.1 | Gene: | Ptbp1 / 19205 | MGIID: | 97791 | Length: | 555 | Species: | Mus musculus |
Alignment Length: | 602 | Identity: | 325/602 - (53%) |
---|---|---|---|
Similarity: | 398/602 - (66%) | Gaps: | 86/602 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 323 RGSDELLSQAAVMAP------ASDNNNQDLATKKAKLEPGTVLAGGIAKASKVIHLRNIPNESGE 381
Fly 382 ADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELK 446
Fly 447 TDQGHNNSTAHSD-YSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTN 510
Fly 511 AAGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 575
Fly 576 LDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLLI 640
Fly 641 AARQRPSLSVNGLGAPGVL--PPFALGLGTPLTGGYNNALPNLAAFSLAN-SGALQTTA------ 696
Fly 697 ---------PAMRGYSN-VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEP 751
Fly 752 QQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNI 816
Fly 817 YPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHNH 881
Fly 882 QLSESNHLRVSFSKSNI 898 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
heph | NP_001247399.1 | hnRNP-L_PTB | 366..898 | CDD:273733 | 307/551 (56%) |
RRM1_PTBP1_like | 368..448 | CDD:241132 | 46/79 (58%) | ||
RRM2_PTBP1_like | 516..611 | CDD:241137 | 72/94 (77%) | ||
RRM3_PTBP1_like | 705..778 | CDD:240869 | 49/72 (68%) | ||
RRM4_PTBP1_like | 822..897 | CDD:240871 | 53/74 (72%) | ||
Ptbp1 | NP_001070831.1 | hnRNP-L_PTB | 56..555 | CDD:273733 | 307/551 (56%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 123 | 1.000 | Domainoid score | I5560 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1190 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H49188 | |
Inparanoid | 1 | 1.050 | 521 | 1.000 | Inparanoid score | I1252 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S2018 |
OMA | 1 | 1.010 | - | - | QHG58575 | |
OrthoDB | 1 | 1.010 | - | - | D1545178at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001151 | |
OrthoInspector | 1 | 1.000 | - | - | otm43656 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101075 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15592 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4107 |
SonicParanoid | 1 | 1.000 | - | - | X703 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
17 | 16.820 |