DRSC/TRiP Functional Genomics Resources

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Protein Alignment heph and Ptbp1

DIOPT Version :10

Sequence 1:NP_001247399.1 Gene:heph / 48571 FlyBaseID:FBgn0011224 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001070831.1 Gene:Ptbp1 / 19205 MGIID:97791 Length:555 Species:Mus musculus


Alignment Length:602 Identity:325/602 - (53%)
Similarity:398/602 - (66%) Gaps:86/602 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 RGSDELLSQAAVMAP------ASDNNNQDLATKKAKLEPGTVLAGGIAKASKVIHLRNIPNESGE 381
            ||||||.|......|      ||..|..|  :||.|   |...:.|:  .|:|||:|.:|::..|
Mouse    14 RGSDELFSTCVSNGPFIMSSSASAANGND--SKKFK---GDNRSAGV--PSRVIHVRKLPSDVTE 71

  Fly   382 ADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELK 446
            .:||:||:|||:|||:|:|||||||||||..|.:|.:||:.||...|.:||:.:|:|||||:|||
Mouse    72 GEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELK 136

  Fly   447 TDQGHNNSTAHSD-YSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTN 510
            ||...|.:.|.:. .:|.|..||:   |:.||:|                     :||:||   .
Mouse   137 TDSSPNQARAQAALQAVNSVQSGN---LALAASA---------------------AAVDAG---M 174

  Fly   511 AAGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 575
            |..|.:.|||:|||:|.|||:||:|||||.::|.||||:||||||.||||:||.|..||||||..
Mouse   175 AMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 239

  Fly   576 LDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPTAGGLMNTNDLLLI 640
            ||||||||.|||||||.||||:||||||||||||:|.|.||.|    |..|:.       |..:.
Mouse   240 LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSG----DSQPSL-------DQTMA 293

  Fly   641 AARQRPSLSVNGLGAPGVL--PPFALGLGTPLTGGYNNALPNLAAFSLAN-SGALQTTA------ 696
            ||          .||||::  .|:| |.|.|.|    .|:|..|..|:.| .|||...|      
Mouse   294 AA----------FGAPGIMSASPYA-GAGFPPT----FAIPQAAGLSVPNVHGALAPLAIPSAAA 343

  Fly   697 ---------PAMRGYSN-VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEP 751
                     |.:.|..| ||||||||.|.|||.:||.||||||||||||||:|||::||:|||:.
Mouse   344 AAAASRIAIPGLAGAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADG 408

  Fly   752 QQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNI 816
            .||.||||||:..:|.||.:|:..||||:||||:|||.|.|||:||..:||||||||||||:|||
Mouse   409 SQAQLAMSHLNGHKLHGKSVRITLSKHQSVQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNI 473

  Fly   817 YPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHNH 881
            :||||||||||||.|.||||:|..|:||...||.||||.|||||||:|:.||||||.|||::|||
Mouse   474 FPPSATLHLSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNH 538

  Fly   882 QLSESNHLRVSFSKSNI 898
            .|.|::|||||||||.|
Mouse   539 DLGENHHLRVSFSKSTI 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hephNP_001247399.1 hnRNP-L_PTB 366..898 CDD:273733 307/551 (56%)
Ptbp1NP_001070831.1 hnRNP-L_PTB 56..555 CDD:273733 307/551 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 435..457 15/21 (71%)

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