DRSC/TRiP Functional Genomics Resources

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Protein Alignment heph and sm

DIOPT Version :10

Sequence 1:NP_001247399.1 Gene:heph / 48571 FlyBaseID:FBgn0011224 Length:898 Species:Drosophila melanogaster
Sequence 2:XP_061514876.1 Gene:sm / 1280613 VectorBaseID:AGAMI1_001350 Length:516 Species:Anopheles gambiae


Alignment Length:505 Identity:131/505 - (25%)
Similarity:209/505 - (41%) Gaps:140/505 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   471 LPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESLMYPVSLDIL 535
            :||::..|  :||.|.:.:...               ..:.|..||.:|...:.:.:||:::|:|
Mosquito    37 VPLNSRNN--NNNINVTDEPRR---------------KRDVATRPNHILLFTILNPIYPITVDVL 84

  Fly   536 HQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNV 600
            |.|....|:|.:||.| |.|..||::::....||..||..|:|.:||:|||||:||.:|...|||
Mosquito    85 HTICHPNGQVQRIVIF-KKNGVQAMVEFDSIESATRAKDSLNGCDIYSGCCTLKIDYAKPEKLNV 148

  Fly   601 -KYNNDKSRDFT-------------------NPALPPGEP--------------GVDIMPTAGGL 631
             |.::|.|.|:|                   :|.|..|.|              .....||.|  
Mosquito   149 YKNDSDSSWDYTLVAATTVKEVGNGRSPLLQDPTLFGGRPQPYSKYLSPSHTPYNEYSQPTQG-- 211

  Fly   632 MNTNDLLLIAARQRPSLSVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLA------------AF 684
                      .|.:|:|    |||                ||.|...||.:            |.
Mosquito   212 ----------TRSKPAL----LGA----------------GGGNGFPPNFSPPDFHPSENWKPAA 246

  Fly   685 SLANSGALQTTAPAMRGYSN----------VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYN 739
            :..:.|.::.......|.:|          |::|..|:......|.||.||.:||:|.|:|.|..
Mosquito   247 AGTHVGLMKDPPLPRNGPTNFIQPTQQQGAVMMVYGLDNGTANTDKLFNLFCLYGNVVRIKFLKT 311

  Fly   740 KKDSALIQMAEPQQAYLAMSHLDKLRLW--GKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPL 802
            |:.:|::||.:.......:.||:.:.:.  || |::..||...:         :.:|..|:. |.
Mosquito   312 KEGTAMVQMGDAIAVERCVQHLNNIPIGNDGK-IQIAFSKQNFL---------SEVTNPYTL-PD 365

  Fly   803 H--RFKK-PGSKNYQ----------NIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFF 854
            |  .||: .||||.:          .|.|||..||..|.|...:::.:..||.||.......:.|
Mosquito   366 HTPSFKEYTGSKNNRFLSLTQASKNRIQPPSKILHFFNTPPGLTDEQLIAAFGSNDCHPSQVRMF 430

  Fly   855 P--KDRKMA-LLQLLSVEEAVLALIKMHNHQLSESNH-----LRVSFSKS 896
            |  .:|..: |::..||..||.|::|.::..:.....     :::.||.|
Mosquito   431 PLKSERSSSGLVEFPSVALAVQAIMKCNHTAIDHKGTKFPFIMKLCFSSS 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hephNP_001247399.1 hnRNP-L_PTB 366..898 CDD:273733 131/505 (26%)
smXP_061514876.1 None

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