DRSC/TRiP Functional Genomics Resources

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Protein Alignment heph and hnrnpll

DIOPT Version :10

Sequence 1:NP_001247399.1 Gene:heph / 48571 FlyBaseID:FBgn0011224 Length:898 Species:Drosophila melanogaster
Sequence 2:XP_073773313.1 Gene:hnrnpll / 110440112 -ID:- Length:529 Species:Danio rerio


Alignment Length:620 Identity:150/620 - (24%)
Similarity:267/620 - (43%) Gaps:129/620 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 SPKKVRIDEQYIYKLNYLRGSDELLSQAAVMAP--ASDNNNQDLATKKAKLEPGTVLAGGIAKAS 367
            :||::::..:      .|...:|..|.:|....  :|....:|.:::..::.|           |
Zfish    10 APKRLKVCSE------ELEDGEESDSASAEEEQRWSSAAERKDSSSETHRIAP-----------S 57

  Fly   368 KVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRG 432
            .|:|:|.:.....|||::.....||.:..|:::..|.||.:|..:..||...|||.:.....:.|
Zfish    58 PVVHVRGLCESVVEADLVESLEKFGNICYVMMMPFKRQALVEFEEVESADRCVSCGSQEAVYIAG 122

  Fly   433 RMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGIL 497
            :..|..:|..:.:                                    ....::.|.||.    
Zfish   123 QQAYFNYSTSKRI------------------------------------TRPTNADDPNSG---- 147

  Fly   498 QNTSAVNAGGNTNAAGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQ 562
                              |.||.:.:::.:||::.|:|:.:....|.||:||.| |.|..||:::
Zfish   148 ------------------NKVLLLSIQNPLYPITTDVLYTVCNPIGNVLRIVIF-KRNGIQAMVE 193

  Fly   563 YPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMPT 627
            :....:||.||:.|:|.:||.|||||:|:.::.:.|||..|::.|.|:|.|.|...|.|      
Zfish   194 FESIQNAQKAKAALNGADIYAGCCTLKIEYARPSRLNVIRNDNDSWDYTKPFLLRRERG------ 252

  Fly   628 AGGLMNTNDLLLIAARQR--------PSLSVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAF 684
                         ..|||        .|.|.||.||...|.|.....|    ||..::.....|.
Zfish   253 -------------KGRQRQAILGEHPSSYSNNGYGAHCPLLPLPSSSG----GGGGSSRYKRCAV 300

  Fly   685 SLANSGALQTTAPAMRGY----SNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSAL 745
            .:..  .:....|....|    |:|.:||.|:...:....:|.||.:||::::||.:.:...:||
Zfish   301 DVGE--VVSYPLPQSSSYTPHCSSVAMVSGLHSASMNCTRIFNLFCLYGNIEKVKFMKSVPGTAL 363

  Fly   746 IQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPK---EGQPDAGLTRDYSQNPLHRFKK 807
            ::|.:......|::||:.::::||.:.|..||..|| :|.   |.:..:...:|::....:||..
Zfish   364 VEMGDEYAVDRAITHLNSIKVFGKRLNVCVSKQHAV-IPSQVFELEDGSSSYKDFAMTRNNRFSS 427

  Fly   808 PGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNS----FEVKAFKFFPKDRKMA-LLQLLS 867
            .|..:...|.|||..||..|:|.|.:|:|::...:.:.    .:.|.|...|..:.:: ||:..|
Zfish   428 AGQASKNIIQPPSCVLHFYNVPPSITEEDLQRLCSDHDVPGFIKYKVFDAKPSSKTISGLLEFDS 492

  Fly   868 VEEAVLALIKMHNHQL-----SESNHLRVSFSKSN 897
            ...||..|..::::|:     |....|::.||.|:
Zfish   493 KTHAVEVLTVLNHYQIRIPNGSNPYTLKLCFSTSS 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hephNP_001247399.1 hnRNP-L_PTB 366..898 CDD:273733 141/557 (25%)
hnrnpllXP_073773313.1 None

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