| Sequence 1: | NP_001247399.1 | Gene: | heph / 48571 | FlyBaseID: | FBgn0011224 | Length: | 898 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002942947.3 | Gene: | rbm20 / 100495938 | XenbaseID: | XB-GENE-6465465 | Length: | 1064 | Species: | Xenopus tropicalis |
| Alignment Length: | 503 | Identity: | 110/503 - (21%) |
|---|---|---|---|
| Similarity: | 182/503 - (36%) | Gaps: | 148/503 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 114 AQAQAQAMLQTYMQLQVNSAVGVSTAPATPTKPVAAQIPGAISGPIAGPVPVSVPTQFFTAPSTP 178
Fly 179 LTIIPAAAVASSAMFATAATPTSAATTP-----TNNVNNTVNLSAVSRTTTTTTKKQPQAVADAV 238
Fly 239 LSAVG---GN----------------VGTAVGGGTISSLLGP--EPLP----------------- 265
Fly 266 --------------IMPHH----------LPLASVRGCSSASSGCSSASSDCSMPS-------PT 299
Fly 300 SL---------HLSSPKKVRIDEQYIYKLN----YLRGS---------DELLSQAAVMAPASDNN 342
Fly 343 NQDLATKKA--KLEPGTVLAGGIAKA------SKVIHLRNIPNES-GEADVIALGIPFGRVTNVL 398
Fly 399 VLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFS-NHRELKTDQGHNNSTA-----H 457
Fly 458 SD-----------YSVQSPASGSPLPLSAAANATSNNANSSSDSNSAM 494 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| heph | NP_001247399.1 | hnRNP-L_PTB | 366..898 | CDD:273733 | 46/153 (30%) |
| RRM1_PTBP1_like | 368..448 | CDD:241132 | 33/81 (41%) | ||
| RRM2_PTBP1_like | 516..611 | CDD:241137 | |||
| RRM3_PTBP1_like | 705..778 | CDD:240869 | |||
| RRM4_PTBP1_like | 822..897 | CDD:240871 | |||
| rbm20 | XP_002942947.3 | RRM_RBM20 | 397..472 | CDD:410086 | 31/74 (42%) |
| PTZ00121 | <562..>756 | CDD:173412 | |||
| ZnF_U1 | 996..1030 | CDD:197732 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1545178at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR15592 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 3.110 | |||||