Sequence 1: | NP_001247399.1 | Gene: | heph / 48571 | FlyBaseID: | FBgn0011224 | Length: | 898 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001120904.1 | Gene: | hnrnpll / 100151733 | XenbaseID: | XB-GENE-492379 | Length: | 531 | Species: | Xenopus tropicalis |
Alignment Length: | 559 | Identity: | 143/559 - (25%) |
---|---|---|---|
Similarity: | 247/559 - (44%) | Gaps: | 121/559 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 367 SKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMR 431
Fly 432 GRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGI 496
Fly 497 LQNTSAVNAGGNTNAAGGPNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALI 561
Fly 562 QYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDIMP 626
Fly 627 TAGGLMNTNDLLLIAARQR--------PSLSVNGLGAPGVLPP----FALGLGTPLTGGYNNALP 679
Fly 680 NLAAFSLANSGALQTTAPAMRG---YSNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKK 741
Fly 742 DSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPK---EGQPDAGLTRDYSQNPLH 803
Fly 804 RFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAF----TSNSFEVKAFKFFPKDRKMA-LL 863
Fly 864 QLLSVEEAVLALIKMHNHQLSESN-----HLRVSFSKSN 897 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
heph | NP_001247399.1 | hnRNP-L_PTB | 366..898 | CDD:273733 | 143/559 (26%) |
RRM1_PTBP1_like | 368..448 | CDD:241132 | 18/79 (23%) | ||
RRM2_PTBP1_like | 516..611 | CDD:241137 | 40/94 (43%) | ||
RRM3_PTBP1_like | 705..778 | CDD:240869 | 22/72 (31%) | ||
RRM4_PTBP1_like | 822..897 | CDD:240871 | 23/84 (27%) | ||
hnrnpll | NP_001120904.1 | hnRNP-L_PTB | 63..530 | CDD:273733 | 143/559 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1545178at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |