DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sam-S and mat2al

DIOPT Version :9

Sequence 1:NP_524923.1 Gene:Sam-S / 48552 FlyBaseID:FBgn0005278 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001035469.1 Gene:mat2al / 678634 ZFINID:ZDB-GENE-060421-5255 Length:390 Species:Danio rerio


Alignment Length:385 Identity:263/385 - (68%)
Similarity:323/385 - (83%) Gaps:0/385 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SYDMEDGATFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITS 84
            |..::.|.|||||||||||||.||||||||||:|||:|.|||:::||||.|:||||||||||:||
Zfish     4 SGQLKSGKTFLFTSESVGEGHSDKMCDQISDAVLDAYLTQDPDSRVACECVSKTGMILLCGEVTS 68

  Fly    85 KAVVDYQKVVRETVQHIGYDDSSKGFDWKTLNLLVAIEQQSPNIANGVHINREEEDVGAGDQGIM 149
            |||||.|:|||:||:.|||||||||||:||.|:||:::.|...|::.|...|:.||:||||||:|
Zfish    69 KAVVDLQRVVRDTVKTIGYDDSSKGFDYKTCNVLVSLQPQVSEISDCVFEGRDSEDIGAGDQGLM 133

  Fly   150 FGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGSAVPKRVHTI 214
            |||||||||||||||::||||||.|:.||.::.|..|..||||||||.||..|.|:..|.||||:
Zfish   134 FGYATDETEECMPLTILLAHKLNYKMKELSKTGVCPWILPDSKTQVTVEYRDNMGAMEPVRVHTV 198

  Fly   215 VVSMQHSEKISLETLRSEVMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPMGDAGLTGRKIIV 279
            |:|:|||..|:||.:|..:||||||.||||||:|..||.|:.|.|.|::|||.||||||||||||
Zfish   199 VISVQHSPDITLEDIRHNLMEKVVKAVIPAKYLDDKTIYHLLPSGKFLLGGPQGDAGLTGRKIIV 263

  Fly   280 DTYGGWGAHGGGAFSGKDFTKVDRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLAEPLSITVF 344
            |||||||.||||||||||::|||||.||||||||||||||.||:|.|||:|||||::.|||::||
Zfish   264 DTYGGWGGHGGGAFSGKDYSKVDRSGAYAARWVAKSLVKAKLCRRVLVQISYAIGISHPLSVSVF 328

  Fly   345 DYGTSHKSQKELLDIIRRNFDLRPGKIVKDLNLRQPIYQRTSTYGHFGRAGFSWEEAKPL 404
            .||||.:.:.:||:|:::|||||||.|||:|:|::||||:|:.||||||.||.||:.|.|
Zfish   329 HYGTSTRDEDDLLEIVKKNFDLRPGVIVKELDLKKPIYQKTACYGHFGREGFPWEKPKKL 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sam-SNP_524923.1 PTZ00104 28..408 CDD:240268 261/377 (69%)
S-AdoMet_synt_N 28..125 CDD:278846 74/96 (77%)
S-AdoMet_synt_M 140..261 CDD:280867 78/120 (65%)
S-AdoMet_synt_C 263..399 CDD:280868 99/135 (73%)
mat2alNP_001035469.1 PTZ00104 11..388 CDD:240268 260/376 (69%)
S-AdoMet_synt_N 12..108 CDD:278846 74/95 (78%)
S-AdoMet_synt_M 124..245 CDD:280867 78/120 (65%)
S-AdoMet_synt_C 247..383 CDD:280868 99/135 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580861
Domainoid 1 1.000 240 1.000 Domainoid score I2212
eggNOG 1 0.900 - - E1_COG0192
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61243
OrthoDB 1 1.010 - - D357186at33208
OrthoFinder 1 1.000 - - FOG0000746
OrthoInspector 1 1.000 - - otm24268
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11964
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X478
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.820

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