DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sam-S and mat1a

DIOPT Version :9

Sequence 1:NP_524923.1 Gene:Sam-S / 48552 FlyBaseID:FBgn0005278 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_956165.1 Gene:mat1a / 334195 ZFINID:ZDB-GENE-030131-6127 Length:390 Species:Danio rerio


Alignment Length:385 Identity:275/385 - (71%)
Similarity:331/385 - (85%) Gaps:0/385 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DMEDGATFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKA 86
            |:.|..:|:|||||||||||||:|||||||:|||||||||:||||||||.||||:||||||||:|
Zfish     6 DVHDDGSFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPDAKVACETVCKTGMVLLCGEITSRA 70

  Fly    87 VVDYQKVVRETVQHIGYDDSSKGFDWKTLNLLVAIEQQSPNIANGVHINREEEDVGAGDQGIMFG 151
            .|||||:||:|::|||||:|.||||:||.|:|||:|||||:||.|||::|.|||:||||||:|||
Zfish    71 NVDYQKIVRDTIKHIGYDNSEKGFDYKTCNVLVALEQQSPDIAQGVHVDRHEEDIGAGDQGLMFG 135

  Fly   152 YATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGSAVPKRVHTIVV 216
            |||||||||||||:|||||||.|:|||||.....|.|||||||||..|....|:.:|.||||:|:
Zfish   136 YATDETEECMPLTIVLAHKLNSKMAELRRDGTIPWLRPDSKTQVTVHYKQENGAVIPLRVHTVVI 200

  Fly   217 SMQHSEKISLETLRSEVMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPMGDAGLTGRKIIVDT 281
            |:||.:.||||..:..:.|||:|.|:||:|:|..|:.|:.|.|.||||||.||||:|||||||||
Zfish   201 SVQHDDNISLEEQQRILKEKVIKAVVPARYLDDKTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDT 265

  Fly   282 YGGWGAHGGGAFSGKDFTKVDRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLAEPLSITVFDY 346
            ||||||||||||||||:||||||||||||||||||||:.||:|.|||||||||:|.||||::|.|
Zfish   266 YGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKSKLCRRVLVQVSYAIGVAHPLSISLFTY 330

  Fly   347 GTSHKSQKELLDIIRRNFDLRPGKIVKDLNLRQPIYQRTSTYGHFGRAGFSWEEAKPLEI 406
            |:|.|::||||.|:.:|||||||.||:||||::|.||.|:.||||||:.|.||.||.|::
Zfish   331 GSSEKTEKELLHIVNKNFDLRPGVIVRDLNLKRPFYQNTACYGHFGRSEFPWEMAKTLKV 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sam-SNP_524923.1 PTZ00104 28..408 CDD:240268 273/379 (72%)
S-AdoMet_synt_N 28..125 CDD:278846 77/96 (80%)
S-AdoMet_synt_M 140..261 CDD:280867 74/120 (62%)
S-AdoMet_synt_C 263..399 CDD:280868 104/135 (77%)
mat1aNP_956165.1 PTZ00104 11..389 CDD:240268 272/377 (72%)
S-AdoMet_synt_N 12..109 CDD:278846 77/96 (80%)
S-AdoMet_synt_M 124..245 CDD:280867 74/120 (62%)
S-AdoMet_synt_C 247..383 CDD:280868 104/135 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580862
Domainoid 1 1.000 240 1.000 Domainoid score I2212
eggNOG 1 0.900 - - E1_COG0192
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 601 1.000 Inparanoid score I916
OMA 1 1.010 - - QHG61243
OrthoDB 1 1.010 - - D357186at33208
OrthoFinder 1 1.000 - - FOG0000746
OrthoInspector 1 1.000 - - otm24268
orthoMCL 1 0.900 - - OOG6_100388
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R708
SonicParanoid 1 1.000 - - X478
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.700

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