DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sam-S and sam1

DIOPT Version :10

Sequence 1:NP_524923.1 Gene:Sam-S / 48552 FlyBaseID:FBgn0005278 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_596731.1 Gene:sam1 / 2539943 PomBaseID:SPBC14F5.05C Length:382 Species:Schizosaccharomyces pombe


Alignment Length:378 Identity:251/378 - (66%)
Similarity:306/378 - (80%) Gaps:0/378 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 TFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAVVDYQK 92
            ||||||||||||||||:|||||||||||.||.||.:||||||.:||||:::.||||:::.:||||
pombe     4 TFLFTSESVGEGHPDKICDQISDAILDACLKDDPFSKVACETASKTGMVMVFGEITTRSQIDYQK 68

  Fly    93 VVRETVQHIGYDDSSKGFDWKTLNLLVAIEQQSPNIANGVHINREEEDVGAGDQGIMFGYATDET 157
            |:|.|::.||||||.||||:||.|:|||||||||:||.|:|..:..|::||||||||||||||||
pombe    69 VIRNTIKSIGYDDSEKGFDYKTCNVLVAIEQQSPDIAQGLHYEKALEELGAGDQGIMFGYATDET 133

  Fly   158 EECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGSAVPKRVHTIVVSMQHSE 222
            .|.:|||::||||||..::..||.....|.|||:|||||.||....|:.:|:||.|||||.||::
pombe   134 PEKLPLTILLAHKLNAAMSVARRDGSLPWLRPDTKTQVTIEYEEENGAVIPRRVDTIVVSAQHAD 198

  Fly   223 KISLETLRSEVMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPMGDAGLTGRKIIVDTYGGWGA 287
            .||.|.||||::||::|..:||..:|..|:.||.|.|.||:|||.||||||||||||||||||||
pombe   199 SISTEDLRSEILEKIIKPTVPAHLLDEKTVYHIQPSGRFVVGGPQGDAGLTGRKIIVDTYGGWGA 263

  Fly   288 HGGGAFSGKDFTKVDRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLAEPLSITVFDYGTSHKS 352
            ||||||||||::||||||||||||:|||||.|||.:|||||:|||||:||||||.|..||||.|:
pombe   264 HGGGAFSGKDYSKVDRSAAYAARWIAKSLVAAGLARRCLVQLSYAIGVAEPLSIFVNTYGTSSKT 328

  Fly   353 QKELLDIIRRNFDLRPGKIVKDLNLRQPIYQRTSTYGHFGRAGFSWEEAKPLE 405
            ..||::|||:|||||||.:||.|.|:.|.|..|::||||......||:.|.|:
pombe   329 SAELVEIIRKNFDLRPGVLVKSLKLQTPFYLSTASYGHFTDQSKPWEQPKELK 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sam-SNP_524923.1 S-AdoMet_synt 30..399 CDD:350837 245/368 (67%)
sam1NP_596731.1 PTZ00104 1..381 CDD:240268 250/376 (66%)

Return to query results.
Submit another query.