DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Sam-S and Mat2a

DIOPT Version :9

Sequence 1:	NP_524923.1	Gene:	Sam-S / 48552	FlyBaseID:	FBgn0005278	Length:	408	Species:	Drosophila melanogaster
Sequence 2:	NP_663544.1	Gene:	Mat2a / 232087	MGIID:	2443731	Length:	395	Species:	Mus musculus

Alignment Length:	394	Identity:	285/394 - (72%)
Similarity:	344/394 - (87%)	Gaps:	3/394 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    14 NGSNGNSYD--MEDGATFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMI 76
            ||.....::  :|:| ||||||||||||||||:|||||||:|||||:|||:||||||||||||||
Mouse     2 NGQLNGFHEAFIEEG-TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMI 65

  Fly    77 LLCGEITSKAVVDYQKVVRETVQHIGYDDSSKGFDWKTLNLLVAIEQQSPNIANGVHINREEEDV 141
            ||.|||||:|.:||||||||.::||||||||||||:||.|:|||:|||||:||.|||::|.|||:
Mouse    66 LLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRNEEDI 130

  Fly   142 GAGDQGIMFGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGSA 206
            ||||||:||||||||||||||||:|||||||.|:|||||:....|.|||||||||.:|:.::|:.
Mouse   131 GAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAV 195

  Fly   207 VPKRVHTIVVSMQHSEKISLETLRSEVMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPMGDAG 271
            :|.||||||:|:||.|::.|:.:|..:.|||:|.|:||||:|.:||.|:.|.|.||||||.||||
Mouse   196 LPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAG 260

  Fly   272 LTGRKIIVDTYGGWGAHGGGAFSGKDFTKVDRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLA 336
            ||||||||||||||||||||||||||:||||||||||||||||||||.|||:|.|||||||||::
Mouse   261 LTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVS 325

  Fly   337 EPLSITVFDYGTSHKSQKELLDIIRRNFDLRPGKIVKDLNLRQPIYQRTSTYGHFGRAGFSWEEA 401
            .||||::|.||||.||::|||:|:::|||||||.||:||:|::||||||:.||||||..|.||..
Mouse   326 HPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFGRDSFPWEVP 390

  Fly   402 KPLE 405
            |.|:
Mouse   391 KKLK 394

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Sam-S	NP_524923.1	PTZ00104	28..408	CDD:240268	281/378 (74%)
		S-AdoMet_synt_N	28..125	CDD:278846	81/96 (84%)
		S-AdoMet_synt_M	140..261	CDD:280867	76/120 (63%)
		S-AdoMet_synt_C	263..399	CDD:280868	107/135 (79%)
Mat2a	NP_663544.1	PTZ00104	16..395	CDD:240268	282/380 (74%)
Mat2a	NP_663544.1	Flexible loop. /evidence=ECO:0000250\|UniProtKB:P0A817	113..125		8/11 (73%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167837261
Domainoid	1	1.000	238	1.000	Domainoid score	I2294
eggNOG	1	0.900	-	-		E1_COG0192
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H38112
Inparanoid	1	1.050	604	1.000	Inparanoid score	I930
Isobase	1	0.950	-	0	Normalized mean entropy	S107
OMA	1	1.010	-	-		QHG61243
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000746
OrthoInspector	1	1.000	-	-		otm43992
orthoMCL	1	0.900	-	-		OOG6_100388
Panther	1	1.100	-	-	LDO	PTHR11964
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R708
SonicParanoid	1	1.000	-	-		X478
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	17	16.740