DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sam-S and sams-1

DIOPT Version :10

Sequence 1:NP_524923.1 Gene:Sam-S / 48552 FlyBaseID:FBgn0005278 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001366882.1 Gene:sams-1 / 181370 WormBaseID:WBGene00008205 Length:403 Species:Caenorhabditis elegans


Alignment Length:378 Identity:258/378 - (68%)
Similarity:315/378 - (83%) Gaps:0/378 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAVVDYQKV 93
            ||||||||.||||||||||||||:||||||||||||||||||.||||::||||||||||||||.:
 Worm     5 FLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKAVVDYQVL 69

  Fly    94 VRETVQHIGYDDSSKGFDWKTLNLLVAIEQQSPNIANGVHINREEEDVGAGDQGIMFGYATDETE 158
            ||..::.||:.|||.|||.||.|:|||:|||||.||.|||:|::.||||||||||||||||||||
 Worm    70 VRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQGIMFGYATDETE 134

  Fly   159 ECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGSAVPKRVHTIVVSMQHSEK 223
            |.||||::|:||:|.::.:|||:....|.|||||:|||.||....|:.:|.||||:|||.|||..
 Worm   135 ETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGATIPLRVHTVVVSTQHSPD 199

  Fly   224 ISLETLRSEVMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPMGDAGLTGRKIIVDTYGGWGAH 288
            ::||.||..::..|:|.||||..:|.:|:.||||||.|::||||||||:||||||||||||||||
 Worm   200 VTLEKLRETILADVIKKVIPASLLDESTVFHINPCGTFIVGGPMGDAGVTGRKIIVDTYGGWGAH 264

  Fly   289 GGGAFSGKDFTKVDRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLAEPLSITVFDYGTSHKSQ 353
            |||||||||.|||||||||||||||.|||||||.||.|||:|||||:|:|:|:.|:.:|||..:.
 Worm   265 GGGAFSGKDPTKVDRSAAYAARWVATSLVKAGLAKRVLVQLSYAIGIAKPISVLVYAFGTSPLTD 329

  Fly   354 KELLDIIRRNFDLRPGKIVKDLNLRQPIYQRTSTYGHFGRAGFSWEEAKPLEI 406
            :||..|:..:|||.||||:|:|:|::|||::|:..||||.:.|.||:.|.|:|
 Worm   330 EELHQIVEDSFDLTPGKIIKELDLKRPIYEKTAENGHFGHSEFPWEQPKALKI 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sam-SNP_524923.1 S-AdoMet_synt 30..399 CDD:350837 252/368 (68%)
sams-1NP_001366882.1 S-AdoMet_synt 6..378 CDD:350837 254/371 (68%)

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