DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sam-S and mat1a

DIOPT Version :9

Sequence 1:NP_524923.1 Gene:Sam-S / 48552 FlyBaseID:FBgn0005278 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001106625.1 Gene:mat1a / 100127858 XenbaseID:XB-GENE-942699 Length:396 Species:Xenopus tropicalis


Alignment Length:382 Identity:276/382 - (72%)
Similarity:329/382 - (86%) Gaps:0/382 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MEDGATFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAV 87
            :||...|:|||||||||||||:|||||||:|||||.|||:||||||||.||||:||||||||:||
 Frog    13 VEDVGAFMFTSESVGEGHPDKICDQISDAVLDAHLSQDPDAKVACETVCKTGMVLLCGEITSRAV 77

  Fly    88 VDYQKVVRETVQHIGYDDSSKGFDWKTLNLLVAIEQQSPNIANGVHINREEEDVGAGDQGIMFGY 152
            |||||:||:|:::||||||.||||:||.|:|||:|||||:||.|||::|.|||:||||||:||||
 Frog    78 VDYQKIVRDTIKYIGYDDSEKGFDYKTCNVLVALEQQSPDIAQGVHLDRTEEDIGAGDQGLMFGY 142

  Fly   153 ATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGSAVPKRVHTIVVS 217
            ||||||||||||:|||||||.|:|||||:.|..|.|||||||||.:|:...|:.:|.||||||:|
 Frog   143 ATDETEECMPLTIVLAHKLNSKLAELRRNGVLPWLRPDSKTQVTVKYIQKNGAVIPVRVHTIVIS 207

  Fly   218 MQHSEKISLETLRSEVMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPMGDAGLTGRKIIVDTY 282
            :||.|.|||..::..:.|.|:|.|:||||:|..|:.|:.|.|.||||||.||||:||||||||||
 Frog   208 VQHDETISLSDMQEALKEHVIKAVVPAKYLDEKTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTY 272

  Fly   283 GGWGAHGGGAFSGKDFTKVDRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLAEPLSITVFDYG 347
            |||||||||||||||:|||||||||||||||||||.|.||.|.|||||||||:|.|||:::|.||
 Frog   273 GGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVHAKLCHRVLVQVSYAIGVAYPLSVSLFTYG 337

  Fly   348 TSHKSQKELLDIIRRNFDLRPGKIVKDLNLRQPIYQRTSTYGHFGRAGFSWEEAKPL 404
            ||.|::||||||:..|||||||.||:||:|::|:||:|:.||||||..|.||..|.|
 Frog   338 TSEKTEKELLDIVNANFDLRPGVIVRDLDLKKPLYQKTACYGHFGREDFPWEVPKEL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sam-SNP_524923.1 PTZ00104 28..408 CDD:240268 274/377 (73%)
S-AdoMet_synt_N 28..125 CDD:278846 77/96 (80%)
S-AdoMet_synt_M 140..261 CDD:280867 76/120 (63%)
S-AdoMet_synt_C 263..399 CDD:280868 104/135 (77%)
mat1aNP_001106625.1 PTZ00104 15..394 CDD:240268 274/378 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 235 1.000 Domainoid score I2315
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 602 1.000 Inparanoid score I933
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D357186at33208
OrthoFinder 1 1.000 - - FOG0000746
OrthoInspector 1 1.000 - - otm49165
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R708
SonicParanoid 1 1.000 - - X478
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.090

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