Protein Alignment Hrb87F and HRP1

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_014518.1
• Gene: HRP1 / 853997
• SGDID: S000005483
• Length: 534
• Species: Saccharomyces cerevisiae
• Alignment Length: 422
• Identity: 108/422 - (25%)
• Similarity: 166/422 - (39%)
• Gaps: 112/422 - (26%)

  Fly    15 EEITEPEQLR----------KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
            :::|:.::.|          |:|||||::.||:|.|:.:|.|:|.:.|:.:||||.|.|||||||
Yeast   140 QQVTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGF 204

  Fly    70 ITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREY 134
            :::.:...:|.....: |.:||:.::||||:||.|.|...      |:||||:..|...:...|:
Yeast   205 LSFEKPSSVDEVVKTQ-HILDGKVIDPKRAIPRDEQDKTG------KIFVGGIGPDVRPKEFEEF 262

  Fly   135 FKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQ 199
            |..:|.|:...::.|||||:.|||.|:.:|..|.||::...|....|::.:::|:|..:....:.
Yeast   263 FSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPRHMQQKS 327

  Fly   200 GGGGGRGG-----PRAGGRGGQGDRGQ-----GGGGWG--------------------------- 227
            ...||..|     .|.|..|.|||..|     ..||:.
Yeast   328 SNNGGNNGGNNMNRRGGNFGNQGDFNQMYQNPMMGGYNPMMNPQAMTDYYQKMQEYYQQMQKQTG 392

  Fly   228 ------------------------------GQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGS 262
                                          .|.:|:.....|.........|...:.      .:
Yeast   393 MDYTQMYQQQMQQMAMMMPGFAMPPNAMTLNQPQQDSNATQGSPAPSDSDNNKSNDV------QT 451

  Fly   263 GGWNQQGGSGGGPWNNQGG--GNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQSYG 325
            .|......||..|.|...|  |...:|.....|||.....|....|..        ..:|....|
Yeast   452 IGNTSNTDSGSPPLNLPNGPKGPSQYNDDHNSGYGYNRDRGDRDRNDR--------DRDYNHRSG 508

  Fly   326 GGPQRNSNFGNNRPAPYSQGGGGGGFNKGNQG 357
            |..:||..            ||.||:|:.|.|
Yeast   509 GNHRRNGR------------GGRGGYNRRNNG 528

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	34/76 (45%)
		RRM_SF	116..188	CDD:302621	25/71 (35%)
HRP1	NP_014518.1	PABP-1234	<144..463	CDD:130689	85/331 (26%)
		RRM1_Hrp1p	161..236	CDD:409991	33/75 (44%)
		RRM2_Hrp1p	244..321	CDD:409767	27/76 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	182	1.000	Inparanoid score	I949
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.960