Protein Alignment Hrb87F and PAB8

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001185184.1
• Gene: PAB8 / 841399
• AraportID: AT1G49760
• Length: 671
• Species: Arabidopsis thaliana
• Alignment Length: 152
• Identity: 42/152 - (27%)
• Similarity: 72/152 - (47%)
• Gaps: 10/152 - (6%)

  Fly    26 LFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPH-KI 89
            |::|.||...||..|...|.:.|.:|.|.|.:|..|:||.|:|::.|:.......|.|.... .:
plant    47 LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMAL 111

  Fly    90 DGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGK 154
            :||.:....:|....:.....|    .:|:..|....|.:.|.|.|..||.|:|..:..| .:|:
plant   112 NGRAIRVMYSVRDPSLRKSGVG----NIFIKNLDKSIDHKALHETFSAFGPILSCKVAVD-PSGQ 171

  Fly   155 KRGFAFIEFDDYD----PVDKI 172
            .:|:.|:::|..:    .:||:
plant   172 SKGYGFVQYDTDEAAQGAIDKL 193

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	24/76 (32%)
		RRM_SF	116..188	CDD:302621	17/61 (28%)
PAB8	NP_001185184.1	PABP-1234	46..646	CDD:130689	42/152 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910