DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hrb87F and Hnrnpab

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	XP_006246407.1	Gene:	Hnrnpab / 83498	RGDID:	69255	Length:	332	Species:	Rattus norvegicus

Alignment Length:	339	Identity:	112/339 - (33%)
Similarity:	163/339 - (48%)	Gaps:	70/339 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 NGNYDDGEEIT---EPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
            |.|..:|::|.   ..|...|:|:|||.:.|:...||.:|.|:|.:||..:..||.|.|||||||
  Rat    56 NQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGF 120

  Fly    70 ITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREY 134
            |.:..|..::...:.:.|::|||.::||:|:..::  .|     |||:|||||..:..||.:|||
  Rat   121 ILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREY 178

  Fly   135 FKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQ-DMDR 198
            |..||:|.::.:..|....|:|||.||.|.:.|||.|::.:|.|::.....::|.|..|: ...:
  Rat   179 FGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQ 243

  Fly   199 QGGGGGRGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSG 263
            |.|.||||....|.||.                                       ||||   |.
  Rat   244 QYGSGGRGNRNRGNRGS---------------------------------------GGGQ---SQ 266

  Fly   264 GWNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQ---SYG 325
            .|||    |.|.:.|||   .|:..|.|.||||.:.:..       |..|.|.|.:|.|   :||
  Rat   267 SWNQ----GYGNYWNQG---YGYQQGYGPGYGGYDYSPY-------GYYGYGPGYDYSQGSTNYG 317

  Fly   326 GGPQRNSNFGNNRP 339
            ...:|..:..|.:|
  Rat   318 KSQRRGGHQNNYKP 331

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	32/76 (42%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	29/71 (41%)
Hnrnpab	XP_006246407.1	CBFNT	1..75	CDD:311868	5/18 (28%)
		RRM1_hnRNPAB	71..150	CDD:410151	32/78 (41%)
		RRM2_hnRNPAB	155..234	CDD:409997	33/85 (39%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920