DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hrb87F and AT5G19960

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	NP_568388.1	Gene:	AT5G19960 / 832118	AraportID:	AT5G19960	Length:	337	Species:	Arabidopsis thaliana

Alignment Length:	263	Identity:	56/263 - (21%)
Similarity:	99/263 - (37%)	Gaps:	61/263 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly    12 DDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSY 76
            |||..:         ::|||.|..|::.::..|..:|:::.|.::.| ::.|.:.:||:|:|...
plant     4 DDGNSV---------YVGGLPYDITEEAVRRVFSIYGSVLTVKIVND-RSVRGKCYGFVTFSNRR 58

  Fly    77 MIDNA-QNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGG------LRDDHDEECLREY 134
            ..|:| ::.....|.||.|.......|....:|..|.....   ||      .|.|.:.|  |:.
plant    59 SADDAIEDMDGKSIGGRAVRVNDVTTRGGRMNPGPGRLQPH---GGWDRSPDRRSDGNYE--RDR 118

  Fly   135 FKDFGQIVSVNIVSDKDTGKKRGFAFIEFD-------------DYDPVDKIILQKTHSIKNKTLD 186
            :.|..:      ..|:...:::...:||.:             |:|.||:      :..|.:..|
plant   119 YSDRSR------ERDRSQDRRKDHRYIEKERAYEHSHDFERRNDHDMVDR------NGYKERVFD 171

  Fly   187 VKKAIAKQDMDRQGGGGGRGGPRAGGRGGQGDRGQGG-GGWGGQNRQNGGGNWGGAGGGGGFGNS 250
                         |..|...|.|:....|:|..|... .|...:.::.......|..|...|.||
plant   172 -------------GDEGDWRGDRSYVDNGRGINGTSAHEGRSQETKREDSTILDGGRGRDHFSNS 223

  Fly   251 GGN 253
            .|:
plant   224 SGD 226

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	20/77 (26%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	16/90 (18%)
AT5G19960	NP_568388.1	RRM	<4..158	CDD:223796	37/174 (21%)
		RRM_SF	9..80	CDD:409669	20/80 (25%)
		PRK12678	<103..>232	CDD:237171	28/151 (19%)
		Smc	<228..>323	CDD:224117
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910