Protein Alignment Hrb87F and ATRBP45C

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_567764.1
• Gene: ATRBP45C / 828808
• AraportID: AT4G27000
• Length: 415
• Species: Arabidopsis thaliana
• Alignment Length: 405
• Identity: 89/405 - (21%)
• Similarity: 137/405 - (33%)
• Gaps: 132/405 - (32%)

  Fly     3 EQNDSNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGF 67
            :|....|:.:.|    ...::|.|:||.|.....::.|...|...|......|:::.:...|.|:
plant    63 QQYGGGGSQNPG----SAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGY 123

  Fly    68 GFI-------------TYS--------QSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAG 111
            |||             ||:        |::.::.||..              |..|::.:.|.
plant   124 GFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLG--------------AGERRQAEGPE-- 172

  Fly   112 ATVKKLFVGGLRDDHDEECLREYFKD-FGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQ 175
               ..:|||.|..|..:..|.|.||. :..:....:|:|:.||:.:|:.|:.|.|
plant   173 ---HTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFAD---------- 224

  Fly   176 KTHSIKNKTLDVKKAIAKQDMDRQGGGGGRGGPRAG---------------GRGGQGDR------ 219
            ::..|:..|....:..:.:.|        |.||.|.               |..|:.|.
plant   225 ESEQIRAMTEMNGQYCSSRPM--------RTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIF 281

  Fly   220 -GQGGGGWGGQNRQNGGGNWG-------GAGGGGGFGNSGGN---------FGGGQGGGSG---G 264
             |.........:.::..|.:|       .||...||......         ..|.|.||..   .
plant   282 VGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLS 346

  Fly   265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYG--------------GGNSNGSWGGNGGGGGGGGG 315
            |      |..|.|.|...:....|||||.||              ..:.|..:||.     .|||
plant   347 W------GRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYAPPPQDPNAYYGGY-----AGGG 400

  Fly   316 FGNEYQQSYGGGPQR 330
            :|| |||.  ||.|:
plant   401 YGN-YQQP--GGYQQ 412

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	19/97 (20%)
		RRM_SF	116..188	CDD:302621	19/72 (26%)
ATRBP45C	NP_567764.1	RRM1_SECp43_like	81..158	CDD:240790	16/76 (21%)
		ELAV_HUD_SF	91..346	CDD:273741	55/291 (19%)
		RRM2_SECp43_like	172..251	CDD:240791	23/101 (23%)
		RRM3_NGR1_NAM8_like	277..348	CDD:240792	12/76 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910