Sequence 1: | NP_001163602.1 | Gene: | Hrb87F / 48535 | FlyBaseID: | FBgn0004237 | Length: | 385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001190109.1 | Gene: | UBA2A / 824853 | AraportID: | AT3G56860 | Length: | 478 | Species: | Arabidopsis thaliana |
Alignment Length: | 407 | Identity: | 98/407 - (24%) |
---|---|---|---|
Similarity: | 142/407 - (34%) | Gaps: | 115/407 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 EQNDSN----------GNYDDG-----EEITEP---EQL-------------------------- 23
Fly 24 --RKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARP 86
Fly 87 HKIDGRTVEPKRA----------VPRQEIDSP----NAGATVKKLFVGGLRDDHDEECLREYFKD 137
Fly 138 FGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAI-----AKQDM- 196
Fly 197 ---------------DRQGGG--GGRGGPRAGGRGGQGDR---------GQG--------GGGWG 227
Fly 228 -----GQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSG---GWNQQGGSGGG---PWNNQGG 281
Fly 282 GNGGWNGGG--GGGYGG 296 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hrb87F | NP_001163602.1 | RRM1_hnRNPA_like | 25..102 | CDD:241022 | 23/86 (27%) |
RRM_SF | 116..188 | CDD:302621 | 15/71 (21%) | ||
UBA2A | NP_001190109.1 | PABP-1234 | 136..>347 | CDD:130689 | 48/210 (23%) |
RRM_SF | 140..215 | CDD:418427 | 23/74 (31%) | ||
Med15 | 361..>465 | CDD:312941 | 28/105 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |