Protein Alignment Hrb87F and NUC-L2

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_188491.1
• Gene: NUC-L2 / 821392
• AraportID: AT3G18610
• Length: 636
• Species: Arabidopsis thaliana
• Alignment Length: 278
• Identity: 69/278 - (24%)
• Similarity: 118/278 - (42%)
• Gaps: 50/278 - (17%)

  Fly     3 EQNDSNGNYDDGEEITEPEQ-----------LRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVV- 55
            ::.||:....|.|:.:..:|           .:.||.|.|.|:.....::..|::.|.:|||.:
plant   352 KKKDSDVEMVDAEQKSNAKQPKTPTNQTQGGSKTLFAGNLSYQIARSDIENFFKEAGEVVDVRLS 416

  Fly    56 -MKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDGRTVE----PKRAVPRQEIDSP---NAGA 112
             ..|...|   |:|.|.::.......|.......:.||.|.    .:|..||.  .:|   ..|:
plant   417 SFDDGSFK---GYGHIEFASPEEAQKALEMNGKLLLGRDVRLDLANERGTPRN--SNPGRKGEGS 476

  Fly   113 TVKKLFVGG----LRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIE----FDDYDPV 169
            ..:.::|.|    |.:|..::.||.:|...|::..|::.:|::||..||||:|:    ||:
plant   477 QSRTIYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRETGASRGFAYIDLTSGFDE---- 537

  Fly   170 DKIILQKTHS-IKNKTLDVKKAIAKQDMDRQGGGGGRGGPRAGGRGGQGDRGQGGGGWG-----G 228
               .||.:.| |....:.|::: ..:|.| :|....|...|...||...||...||.:.     |
plant   538 ---ALQLSGSEIGGGNIHVEES-RPRDSD-EGRSSNRAPARGAPRGRHSDRAPRGGRFSDRAPRG 597

  Fly   229 QNRQNGG--GNWGGAGGG 244
            ::...|.  |.:...|.|
plant   598 RHSDRGAPRGRFSTRGRG 615

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	20/82 (24%)
		RRM_SF	116..188	CDD:302621	23/80 (29%)
NUC-L2	NP_188491.1	RRM1_NUCLs	385..461	CDD:409884	19/78 (24%)
		RRM2_NUCLs	480..556	CDD:409885	24/82 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920