DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hrb87F and raver2

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	XP_001338083.4	Gene:	raver2 / 797613	ZFINID:	ZDB-GENE-090713-1	Length:	862	Species:	Danio rerio

Alignment Length:	177	Identity:	39/177 - (22%)
Similarity:	69/177 - (38%)	Gaps:	27/177 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 LFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID 90
            |.:..|.|..|....:.....:|||....::....|..|:|:||:.|.:.   |:|..||...:.
Zfish   169 LCVTNLPYTVTATQFQELVRSYGNIERCFLVYSDLTGHSKGYGFVEYMKK---DSASRARSELLG 230

  Fly    91 GRTVEPKRAVPRQEIDSPNAGATV--KKLFVGGL-RDDHDEECLREYFKDFGQIVSVNIVSDKDT 152
            ....:....|...:::...:...:  |.|.|..| .|..|.|.|...|.:..:.|...:..|:.:
Zfish   231 KPMGDRVLMVQWADVNQLTSADHLHSKCLCVDRLPLDFEDSEELAHIFSESYKPVFCQLAQDEGS 295

  Fly   153 GKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQ 199
             ..||||.:|::..:..:.::|                    :||||
Zfish   296 -PVRGFAVVEYETAEQAEAVLL--------------------EMDRQ 321

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	18/75 (24%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	16/72 (22%)
raver2	XP_001338083.4	RRM1_RAVER2	95..164	CDD:241108
		RRM2_RAVER2	168..244	CDD:241110	18/77 (23%)
		RRM_SF	255..352	CDD:327398	21/88 (24%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910