Protein Alignment Hrb87F and pabpn1l

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: XP_021333291.1
• Gene: pabpn1l / 796580
• ZFINID: ZDB-GENE-080709-5
• Length: 166
• Species: Danio rerio
• Alignment Length: 89
• Identity: 24/89 - (26%)
• Similarity: 42/89 - (47%)
• Gaps: 6/89 - (6%)

  Fly    16 EITEPEQL----RKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSY 76
            ::|..|::    |.:::|.:||..|.|.|:.:|...|::..|.:..:..|...:||.:|.:|...
Zfish    25 DMTHEERIDSDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEFSDRE 89

  Fly    77 MIDNAQNARPHKIDGRT--VEPKR 98
            .:..|.........||.  |.|||
Zfish    90 SVRTAMALDETLFRGRVIKVSPKR 113

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	21/76 (28%)
		RRM_SF	116..188	CDD:302621
pabpn1l	XP_021333291.1	RRM_SF	38..113	CDD:327398	19/74 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910