Protein Alignment Hrb87F and Msi2

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: XP_006534494.1
• Gene: Msi2 / 76626
• MGIID: 1923876
• Length: 378
• Species: Mus musculus
• Alignment Length: 399
• Identity: 117/399 - (29%)
• Similarity: 167/399 - (41%)
• Gaps: 86/399 - (21%)

  Fly     5 NDSNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
            |||  .:|.|          |:|||||.::|:.|.|:.:|.|:|.|.:.:||:||.|||||||||
Mouse    14 NDS--QHDPG----------KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 66

  Fly    70 ITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQ-EIDSPNAGAT-------------------- 113
            :|::....:|.......|::|.:|::||.|.||: :..|...|.:
Mouse    67 VTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKSQEQGGSWKRTWTTVQARAASGDQMVT 131

  Fly   114 -VKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKT 177
             .||:|||||..:...|.:::||:.||::....::.||.|.:.|||.|:.|::.|.|:|:.....
Mouse   132 RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHF 196

  Fly   178 HSIKNKTLDVKKAIAKQDMDRQGGGGGRGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAG 242
            |.|.||.::.|||..|:.|...|..|     ||.|.....|....|.|      ..|..|:....
Mouse   197 HEINNKMVECKKAQPKEVMFPPGTRG-----RARGLPYTMDAFMLGMG------MLGYPNFVATY 250

  Fly   243 GGG--GFGNSGG------------NF-------------GGGQGGGSGGWNQQG--GSGGGPWNN 278
            |.|  ||..|.|            :|             ...:|.....::.|.  |:...|
Mouse   251 GRGYPGFAPSYGYQFPALLPYLNASFPAAAYGPVAAAAVAAARGSVLNSYSAQPNFGAPASP--- 312

  Fly   279 QGGGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQSYGGGPQRNSNFGNN-RPAPY 342
                 .|.|....||:.|.||.|......|......|.||...   ...||..|.||:. ...|.
Mouse   313 -----AGSNPARPGGFPGANSPGPVADLYGPASQDSGVGNYIS---AASPQPGSGFGHGIASIPG 369

  Fly   343 SQGGGGGGF 351
            ..|..|..|
Mouse   370 CPGKTGRSF 378

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	34/76 (45%)
		RRM_SF	116..188	CDD:302621	26/71 (37%)
Msi2	XP_006534494.1	RRM1_MSI	23..97	CDD:241020	32/73 (44%)
		PABP-1234	<35..363	CDD:130689	101/349 (29%)
		RRM2_MSI	135..208	CDD:240769	26/72 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910