Protein Alignment Hrb87F and hnrnpab

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: XP_012814656.1
• Gene: hnrnpab / 734098
• XenbaseID: XB-GENE-6042555
• Length: 326
• Species: Xenopus tropicalis
• Alignment Length: 342
• Identity: 121/342 - (35%)
• Similarity: 175/342 - (51%)
• Gaps: 66/342 - (19%)

  Fly     5 NDSNGNYDDG--EEITEP-EQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRG 66
            |.|.|..|.|  .:|:.| .:..|:|:|||.:.|:...||.:|.|:|.:.|..:..||.|.||||
 Frog    43 NASKGEEDAGCVPDISSPLTEGVKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRG 107

  Fly    67 FGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECL 131
            ||||.:..:..:|.....:.|::|||.::||:|:..::  .|     :||:|||||..:..|:.:
 Frog   108 FGFILFKDAASVDKVLEQKEHRLDGRLIDPKKAMAMKK--DP-----IKKIFVGGLNPEAGEDKI 165

  Fly   132 REYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM 196
            ||||:.||:|.::.:..|..|.|:|||.||.|.:.:||.||:.:|.|::.....::|.|..|:..
 Frog   166 REYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCEIKIAQPKEVY 230

  Fly   197 DRQGGGGGRGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGG 261
            .:|  .||||| ..|||||:|.:.||         ||
 Frog   231 QQQ--YGGRGG-SFGGRGGRGGKAQG---------QN---------------------------- 255

  Fly   262 SGGWNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGG-GNSNGSWGGNGGGGGGGGGFGNEYQQ--- 322
               |||    |...:.|||.||.|:.|.|..|||| ||.:.|     |.|..|.|.|.:|.|
 Frog   256 ---WNQ----GYNSYWNQGYGNQGYGGYGQQGYGGYGNYDYS-----GYGYYGYGPGYDYSQGSA 308

  Fly   323 SYGGGPQRNSNFGNNRP 339
            :||..|:|.|:..|.:|
 Frog   309 NYGKAPRRGSHQSNYKP 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	31/76 (41%)
		RRM_SF	116..188	CDD:302621	29/71 (41%)
hnrnpab	XP_012814656.1	CBFNT	1..52	CDD:311868	4/8 (50%)
		RRM1_hnRNPAB	66..140	CDD:241201	30/73 (41%)
		RRM2_hnRNPAB	145..224	CDD:241028	32/85 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920