Protein Alignment Hrb87F and hnrnpab

DIOPT Version :10

• Sequence 1: NP_476806.2
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: XP_012814656.1
• Gene: hnrnpab / 734098
• XenbaseID: XB-GENE-6042555
• Length: 326
• Species: Xenopus tropicalis
• Alignment Length: 342
• Identity: 121/342 - (35%)
• Similarity: 175/342 - (51%)
• Gaps: 66/342 - (19%)

  Fly     5 NDSNGNYDDG--EEITEP-EQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRG 66
            |.|.|..|.|  .:|:.| .:..|:|:|||.:.|:...||.:|.|:|.:.|..:..||.|.||||
 Frog    43 NASKGEEDAGCVPDISSPLTEGVKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRG 107

  Fly    67 FGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECL 131
            ||||.:..:..:|.....:.|::|||.::||:|:..::  .|     :||:|||||..:..|:.:
 Frog   108 FGFILFKDAASVDKVLEQKEHRLDGRLIDPKKAMAMKK--DP-----IKKIFVGGLNPEAGEDKI 165

  Fly   132 REYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM 196
            ||||:.||:|.::.:..|..|.|:|||.||.|.:.:||.||:.:|.|::.....::|.|..|:..
 Frog   166 REYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCEIKIAQPKEVY 230

  Fly   197 DRQGGGGGRGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGG 261
            .:|  .||||| ..|||||:|.:.||         ||
 Frog   231 QQQ--YGGRGG-SFGGRGGRGGKAQG---------QN---------------------------- 255

  Fly   262 SGGWNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGG-GNSNGSWGGNGGGGGGGGGFGNEYQQ--- 322
               |||    |...:.|||.||.|:.|.|..|||| ||.:.|     |.|..|.|.|.:|.|
 Frog   256 ---WNQ----GYNSYWNQGYGNQGYGGYGQQGYGGYGNYDYS-----GYGYYGYGPGYDYSQGSA 308

  Fly   323 SYGGGPQRNSNFGNNRP 339
            :||..|:|.|:..|.:|
 Frog   309 NYGKAPRRGSHQSNYKP 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_476806.2	RRM1_hnRNPA_like	25..102	CDD:409992	31/76 (41%)
		RRM_SF	116..188	CDD:473069	29/71 (41%)
hnrnpab	XP_012814656.1	CBFNT	1..52	CDD:311868	4/8 (50%)
		RRM1_hnRNPAB	61..140	CDD:410151	30/78 (38%)
		RRM2_hnRNPAB	145..224	CDD:409997	32/85 (38%)