Protein Alignment Hrb87F and LOC681410

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: XP_003751688.1
• Gene: LOC681410 / 681410
• RGDID: 1595414
• Length: 307
• Species: Rattus norvegicus
• Alignment Length: 321
• Identity: 152/321 - (47%)
• Similarity: 193/321 - (60%)
• Gaps: 29/321 - (9%)

  Fly    19 EPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQN 83
            |..||.|||||||:.:|::.||:.|||.:|.:.|.||:.:|:|||||.|||:|||.....|.|..
  Rat     2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMA 66

  Fly    84 ARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVS 148
            |.||.:||.|||.||||.|::...|.|.|.|||||||||:.|..|..|.|:|..||.:....|::
  Rat    67 ASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIA 131

  Fly   149 DKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRGGPRAGGR 213
            ||.:||||||.|:.|..:|..||..:.|.|.|:...::||||:.|:|: ..||||.|..  .|||
  Rat   132 DKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI-HAGGGGARAA--RGGR 193

  Fly   214 GGQGDRGQGGGGWGGQNR----QNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGGWNQQGGSGG- 273
            ||...||.||||.||:::    :.|||.:...||.||:|..||..|||..|||...|..||.|.
  Rat   194 GGGRGRGGGGGGGGGRDQNGLAKGGGGGYNSYGGYGGYGAYGGGGGGGSYGGSDYGNGFGGFGSY 258

  Fly   274 -------GPWNNQGGGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQSYGGG 327
                   ||..:.|||     |||||.:||.:::|.:.|..|||||||         ||||
  Rat   259 SQHQSSYGPMKSGGGG-----GGGGGSWGGRSNSGPYRGGYGGGGGGG---------YGGG 305

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	43/76 (57%)
		RRM_SF	116..188	CDD:302621	31/71 (44%)
LOC681410	XP_003751688.1	RRM1_hnRNPA0	5..83	CDD:240772	43/77 (56%)
		RRM2_hnRNPA0	99..178	CDD:241023	36/78 (46%)
		HnRNPA1	250..>269	CDD:288479	6/18 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG46466
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	5	4.890