DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hrb87F and Trnau1ap

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	NP_075416.1	Gene:	Trnau1ap / 65241	RGDID:	619995	Length:	287	Species:	Rattus norvegicus

Alignment Length:	147	Identity:	35/147 - (23%)
Similarity:	69/147 - (46%)	Gaps:	12/147 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 LFIGGLDYRTTDDGLKAHFEKWG-NIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKI 89
            |::|.|:....::.:...|...| .::.|.::::..|....|:.|:.::.   :..|:... |||
  Rat     5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFAD---LATAEKCL-HKI 65

  Fly    90 DGRTVEPKRAVPRQEIDSPNAG-----ATVKKLFVGGLRDDHDEECLREYF-KDFGQIVSVNIVS 148
            :|:.:.......|.:::....|     :....||||.|..|.|:..|.|:| |.:.......:|.
  Rat    66 NGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVL 130

  Fly   149 DKDTGKKRGFAFIEFDD 165
            |: ||..:|:.|::|.|
  Rat   131 DQ-TGVSKGYGFVKFTD 146

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	14/76 (18%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	19/51 (37%)
Trnau1ap	NP_075416.1	RRM1_SECp43	4..87	CDD:410022	15/85 (18%)
		RRM2_SECp43	95..176	CDD:410024	19/53 (36%)
		Trnau1ap	<205..284	CDD:407550
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910