DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hrb87F and elavl3

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	XP_012808614.1	Gene:	elavl3 / 594912	XenbaseID:	XB-GENE-490864	Length:	363	Species:	Xenopus tropicalis

Alignment Length:	164	Identity:	43/164 - (26%)
Similarity:	74/164 - (45%)	Gaps:	20/164 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 NDSNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
            |.:||..||.:        ..|.:..|....|.:..|:.|...|.|....:::|..|.:|.|:||
Frog    24 NGTNGAADDSK--------TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGF 80

  Fly    70 ITYSQSYMIDNAQNA-RPHKIDGRTVEPKRAVPRQEIDSPNAGATVK--KLFVGGLRDDHDEECL 131
            :.|......|.|.|. ...|:..:|::...|.|        :.|:::  .|:|..|....:::.:
Frog    81 VNYVDPNDADKAINTLNGLKLQTKTIKVSYARP--------SSASIRDANLYVSSLPKTMNQKEM 137

  Fly   132 REYFKDFGQIVSVNIVSDKDTGK-KRGFAFIEFD 164
            .:.|..:|:|::..|:.|:.||. .||..||.||
Frog   138 EQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFD 171

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	20/77 (26%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	16/50 (32%)
elavl3	XP_012808614.1	ELAV_HUD_SF	32..362	CDD:273741	39/156 (25%)
		RRM1_Hu	34..111	CDD:241094	19/84 (23%)
		RRM_SF	116..206	CDD:302621	17/56 (30%)
		RRM3_HuC	279..363	CDD:241099
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910