Protein Alignment Hrb87F and msi1b

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001013534.1
• Gene: msi1b / 541389
• ZFINID: ZDB-GENE-050320-86
• Length: 330
• Species: Danio rerio
• Alignment Length: 200
• Identity: 76/200 - (38%)
• Similarity: 116/200 - (57%)
• Gaps: 2/200 - (1%)

  Fly     6 DSNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70
            :|.|:..:......|....|:|||||.::||.:|||.:|.|:|.:.:.:||:||.|||||||||:
Zfish     2 ESEGSQSNLSSSDSPHDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFV 66

  Fly    71 TYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYF 135
            |:.....:|.......|::|.:|::||.|.||:.  .|......||:|||||..:...|.:::||
Zfish    67 TFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRA--QPKLVTRTKKIFVGGLSVNTTIEDVKQYF 129

  Fly   136 KDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQG 200
            ..||::....::.||.|.:.|||.|:.|::.|.|:|:.....|.|.||.::.|||..|:.|...|
Zfish   130 DQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTG 194

  Fly   201 GGGGR 205
            ...||
Zfish   195 SSRGR 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	35/76 (46%)
		RRM_SF	116..188	CDD:302621	26/71 (37%)
msi1b	NP_001013534.1	RRM	<16..161	CDD:223796	59/146 (40%)
		RRM1_MSI1	20..96	CDD:241203	34/75 (45%)
		RRM2_MSI	110..183	CDD:240769	26/72 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910