Protein Alignment Hrb87F and SC35

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001188794.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Alignment Length: 276
• Identity: 55/276 - (19%)
• Similarity: 83/276 - (30%)
• Gaps: 112/276 - (40%)

  Fly     7 SNGNYDDGEEITEP----EQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGF 67
            |||....|.....|    :.:..|.:..|.||||.:.|:..||:.|.:.|:.:.:|..|:.||||
  Fly     2 SNGGGAGGLGAARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 66

  Fly    68 GFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLR 132
            .|:.:......::|..|    :|||.::.:.                                ||
  Fly    67 AFVRFYDKRDAEDALEA----MDGRMLDGRE--------------------------------LR 95

  Fly   133 EYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMD 197
            .....:|:..|   .:...:|::.|
  Fly    96 VQMARYGRPSS---PTRSSSGRRGG---------------------------------------- 117

  Fly   198 RQGGGGGRGGPR------------AGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNS 250
              |||||.||.|            ...|.....|.:..|....:.|..             |..|
  Fly   118 --GGGGGSGGRRRSRSRSPMRRRSRSPRRRSYSRSRSPGSHSPERRSK-------------FSRS 167

  Fly   251 --GGNFGGGQGGGSGG 264
              .|:...|.|.||||
  Fly   168 PVRGDSRNGIGSGSGG 183

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	23/76 (30%)
		RRM_SF	116..188	CDD:302621	6/71 (8%)
SC35	NP_001188794.1	RRM	<24..>100	CDD:223796	25/111 (23%)
		RRM_SRSF2_SRSF8	25..97	CDD:240757	25/107 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910