Protein Alignment Hrb87F and sap-49

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001379265.1
• Gene: sap-49 / 4363023
• WormBaseID: WBGene00004723
• Length: 388
• Species: Caenorhabditis elegans
• Alignment Length: 196
• Identity: 55/196 - (28%)
• Similarity: 93/196 - (47%)
• Gaps: 11/196 - (5%)

  Fly    17 ITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 81
            |.|..|...:::||||.:.::..|.....:.|.:|.|.:.||..|...:||||:.:......|.|
 Worm     6 IVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 70

  Fly    82 -QNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSV- 144
             :.....|:.|:.::..:|...::  :.:.||.:   |||.|..:.||:.|.:.|..||.|:.|
 Worm    71 IKILNMIKLYGKPIKVNKASAHEK--NMDVGANI---FVGNLDPEVDEKLLYDTFSAFGVILQVP 130

  Fly   145 NIVSDKDTGKKRGFAFIEFDDYDPVDKII-LQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRGGP 208
            .|:.|.|:|..:|||||.|..::..|..: ......:.|:.:.|..|..:   |.:|...|....
 Worm   131 KIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR---DSKGERHGTAAE 192

  Fly   209 R 209
            |
 Worm   193 R 193

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	20/77 (26%)
		RRM_SF	116..188	CDD:302621	24/73 (33%)
sap-49	NP_001379265.1	RRM1_SF3B4	15..88	CDD:409771	19/72 (26%)
		RRM2_SF3B4	99..181	CDD:409772	28/87 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910