Protein Alignment Hrb87F and trv

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Alignment Length: 209
• Identity: 49/209 - (23%)
• Similarity: 88/209 - (42%)
• Gaps: 34/209 - (16%)

  Fly    12 DDGEEITEPEQLRK---LFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS 73
            |..||:.....|.|   :|:|.|........|:..|..:|.|.|..|::||:|.:|:|:||:::.
  Fly   297 DSDEEMEYMPPLHKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFI 361

  Fly    74 QSYMIDNAQNARPHK-IDGRTVEPKRAVPRQEIDSPNAGATVKKL----------------FVGG 121
            :....::|..|...: :..|::....|..:    .|.:...:|.|                :|||
  Fly   362 KKSEAESAITAMNGQWLGSRSIRTNWATRK----PPASKENIKPLTFDEVYNQSSPSNCTVYVGG 422

  Fly   122 LRD---DHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNK 183
            :..   ...||.|::.|..:|.|..:.:..||      |:||:.|...:.....|: ..|:.:..
  Fly   423 VNSALTALSEEVLQKTFAPYGAIQEIRVFKDK------GYAFVRFSTKEAATHAIV-GVHNTEIN 480

  Fly   184 TLDVKKAIAKQDMD 197
            ...||.:..|:..|
  Fly   481 AQPVKCSWGKESGD 494

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	21/80 (26%)
		RRM_SF	116..188	CDD:302621	18/90 (20%)
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:240799	19/73 (26%)
		RRM3_TIA1_like	416..491	CDD:240800	19/81 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910