Protein Alignment Hrb87F and hnrnpabb

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_998467.1
• Gene: hnrnpabb / 406594
• ZFINID: ZDB-GENE-040426-2516
• Length: 309
• Species: Danio rerio
• Alignment Length: 351
• Identity: 116/351 - (33%)
• Similarity: 169/351 - (48%)
• Gaps: 68/351 - (19%)

  Fly     4 QNDSNGNYDDGEEITE--------------PEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVV 54
            :|.:..|.:.||...|              .|...|:|:|||.:.|:...||.:|.|:|.::|..
Zfish    11 ENGNEENLNGGEAAGENGAGEGLQIDASKCEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVMDCT 75

  Fly    55 VMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFV 119
            :..|..|.||||||||.:.:|..:|.....:.|::|||.::||||:..::       ..|||:||
Zfish    76 IKMDSNTGRSRGFGFILFKESDSVDRVLQQKEHRLDGRQIDPKRAMAIKK-------EPVKKIFV 133

  Fly   120 GGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKT 184
            |||..:..||.:||||..||:|.::.:.:|..|.|:|||.||.|.:...|.||:.:|.|::....
Zfish   134 GGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKILEKKYHNVCGSK 198

  Fly   185 LDVKKAIAKQDMDRQGGGGGRGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGN 249
            .::|.|..|:...:|     :.|.|.||.||:| ||:||   .||:...|..|:
Zfish   199 CEIKIAQPKEIYQQQ-----QFGARGGGFGGRG-RGRGG---PGQSWNQGYNNY----------- 243

  Fly   250 SGGNFGGGQGGGSGGWNQQGGSGGGPWNNQGGGNGGWNG-GGGGGYGGGNSNGSWGGNGGGGGGG 313
                           |||  |.||     ||.|.||..| ||.||||    |..:.....|.|.|
Zfish   244 ---------------WNQ--GYGG-----QGYGYGGQQGYGGYGGYG----NYDYSSGYYGYGSG 282

  Fly   314 GGFGNEYQQSYGGGPQRNSNFGNNRP 339
            ..:.::...|||..|:|..:....:|
Zfish   283 YDYTDQGAASYGKTPRRGGHQSGYKP 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	32/76 (42%)
		RRM_SF	116..188	CDD:302621	29/71 (41%)
hnrnpabb	NP_998467.1	CBFNT	2..45	CDD:285369	6/33 (18%)
		RRM1_hnRNPAB	46..120	CDD:241201	30/73 (41%)
		RRM_SF	125..204	CDD:302621	32/85 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.920