DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hrb87F and CG3335

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	NP_648337.1	Gene:	CG3335 / 39119	FlyBaseID:	FBgn0036018	Length:	918	Species:	Drosophila melanogaster

Alignment Length:	180	Identity:	52/180 - (28%)
Similarity:	91/180 - (50%)	Gaps:	21/180 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 AEQNDSNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNI--VDVVVMKDPKTKR- 63
            |:.::.:...:|.::  |||....||:..|:::|..:.::.||...|:|  |::...:||:..|
  Fly   659 AKPDEEDSRAEDADD--EPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHTVEIAKRRDPENPRE 721

  Fly    64 --SRGFGFITYSQSYMIDNA-QNARPHKIDGRTVEPKRAVPRQEIDSPNAGA----------TVK 115
              |.|:|||.:.:|.:.::| :|.:...|||..||.||: .|......|.||          |..
  Fly   722 FKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRS-DRVLKTQDNDGAQRRLASQKKQTGT 785

  Fly   116 KLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGK--KRGFAFIEF 163
            |:.|..:........:|:.||.||::.|:.|.....||:  .|||.|:::
  Fly   786 KILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFGFVDY 835

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	27/82 (33%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	15/50 (30%)
CG3335	NP_648337.1	RRM1_RBM19	2..77	CDD:241008
		RRM_SF	250..314	CDD:302621
		RRM3_RBM19	362..440	CDD:241011
		RRM4_RBM19	552..623	CDD:241013
		RRM	<638..845	CDD:223796	52/180 (29%)
		RRM5_RBM19_like	679..760	CDD:240764	26/80 (33%)
		RRM6_RBM19	785..864	CDD:241015	15/51 (29%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463966
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930