Protein Alignment Hrb87F and tardbpa

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: XP_021325436.1
• Gene: tardbpa / 386630
• ZFINID: ZDB-GENE-031030-1
• Length: 396
• Species: Danio rerio
• Alignment Length: 336
• Identity: 89/336 - (26%)
• Similarity: 135/336 - (40%)
• Gaps: 73/336 - (21%)

  Fly    26 LFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID 90
            |.:.||.::||:..||.:|..:|.::.|.|.:|.|:..|:||||:.:: .|.......::.|.||
Zfish   107 LIVLGLPWKTTEQDLKDYFGTFGEVIMVQVKRDAKSGNSKGFGFVRFT-DYETQIKVMSQRHMID 170

  Fly    91 GRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKK 155
            ||..:.|  :|..:. .|:.....:|:|||...:|...:.||::|..:|::..|.|..     ..
Zfish   171 GRWCDCK--LPNSKA-GPDEPMRSRKVFVGRCTEDMTADELRQFFMQYGEVTDVFIPK-----PF 227

  Fly   156 RGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRGGPRAGGRGGQGDRG 220
            |.|||:.|.| |.|.:.:..:...||..::.:..|..|.:..||                ..|||
Zfish   228 RAFAFVTFAD-DQVAQSLCGEDLIIKGTSVHISNAEPKHNNSRQ----------------MMDRG 275

  Fly   221 QGGGGWGGQNRQNGGGNWGGAGGGGGFG-----NSGGNFG----------GGQGGGSGGW----- 265
            : .||:|||                |||     ||..|||          ..|......|
Zfish   276 R-FGGYGGQ----------------GFGSSRSPNSNVNFGALNLNPAMMAAAQAALQSSWGMMGM 323

  Fly   266 -----NQQGGSGGGPWNNQGGGNGGWN-GGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQSY 324
                 ||...||..|....|..:...| ......|..|:|.....|.|......|||.:    |:
Zfish   324 LANQQNQTPASGTNPSGQSGSRDQTQNYSASSNNYNAGSSAALGWGAGTNSAAAGGFNS----SF 384

  Fly   325 GGGPQRNSNFG 335
            |...:..|::|
Zfish   385 GSSMETKSSWG 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	25/75 (33%)
		RRM_SF	116..188	CDD:302621	21/71 (30%)
tardbpa	XP_021325436.1	RRM1_TDP43	106..182	CDD:240767	26/77 (34%)
		RRM	<179..363	CDD:223796	54/223 (24%)
		RRM2_TDP43	192..262	CDD:240768	21/75 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910