Sequence 1: | NP_001163602.1 | Gene: | Hrb87F / 48535 | FlyBaseID: | FBgn0004237 | Length: | 385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956398.1 | Gene: | hnrnpa1b / 378453 | ZFINID: | ZDB-GENE-030912-14 | Length: | 422 | Species: | Danio rerio |
Alignment Length: | 411 | Identity: | 206/411 - (50%) |
---|---|---|---|
Similarity: | 251/411 - (61%) | Gaps: | 60/411 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 EPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQN 83
Fly 84 ARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVS 148
Fly 149 DKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQG------------- 200
Fly 201 --------------GGGGRGGPRAG--GRGGQGDR---GQGGGGWGG----QNRQN--GGGNWGG 240
Fly 241 AGGGGGF--GNSGGN--FGGGQGGGSGGWNQQGGSGGGPWNNQGGGNGGWN--GGGGGGYGGGNS 299
Fly 300 NGSWGGNGGGGGGGGGFGNEYQQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNKGNQGGGQGFAG 364
Fly 365 NNYNTGGGGQGGNMGGGNRRY 385 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hrb87F | NP_001163602.1 | RRM1_hnRNPA_like | 25..102 | CDD:241022 | 52/76 (68%) |
RRM_SF | 116..188 | CDD:302621 | 36/71 (51%) | ||
hnrnpa1b | NP_956398.1 | RRM | <19..187 | CDD:223796 | 99/158 (63%) |
RRM_SF | 31..111 | CDD:302621 | 55/79 (70%) | ||
RRM2_hnRNPA1 | 124..200 | CDD:241024 | 39/75 (52%) | ||
HnRNPA1 | 367..>387 | CDD:288479 | 5/24 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 101 | 1.000 | Domainoid score | I6875 |
eggNOG | 1 | 0.900 | - | - | E33208_3BA81 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 387 | 1.000 | Inparanoid score | I1965 |
OMA | 1 | 1.010 | - | - | QHG46466 | |
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000779 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6517 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103644 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X431 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.740 |