DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hrb87F and LS2

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	NP_611769.2	Gene:	LS2 / 37681	FlyBaseID:	FBgn0034834	Length:	449	Species:	Drosophila melanogaster

Alignment Length:	201	Identity:	48/201 - (23%)
Similarity:	80/201 - (39%)	Gaps:	58/201 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    22 QLRKLFIGGLDYRTTDDGLKAHFE----------KWGNIVDVVVMKDPKTKRSRGFGFITYSQSY 76
            |.|:|::|.:.:..||:.:...|.          |..:.:|...:...:|...:.|.|:.:..
  Fly   109 QARRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQTNLEKNFAFLEFRS-- 171

  Fly    77 MIDNAQNA----------------RPH------KIDGRTVEPKRA--VPRQEI------------ 105
             ||.|..|                |||      .|....:|..|:  ||...:
  Fly   172 -IDEASQALNFDGMVFRGQTLKIRRPHDYQPVPSISVSAMESYRSFRVPAINVAQQPAVTLPVTT 235

  Fly   106 ---DSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYD 167
               ||||      |::||||....:::.::|..:.||::..:|:|.|.:|...:||||.|:.|..
  Fly   236 IVPDSPN------KIYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDTNTNLNKGFAFFEYCDPS 294

  Fly   168 PVDKII 173
            ..|..|
  Fly   295 VTDHAI 300

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	21/110 (19%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	20/58 (34%)
LS2	NP_611769.2	RRM1_U2AF65	110..196	CDD:240676	15/88 (17%)
		RRM2_U2AF65	242..318	CDD:240677	21/65 (32%)
		RRM3_U2AF65	349..436	CDD:240678
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910