Sequence 1: | NP_001163602.1 | Gene: | Hrb87F / 48535 | FlyBaseID: | FBgn0004237 | Length: | 385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001104764.1 | Gene: | Hnrnpa3 / 362152 | RGDID: | 727807 | Length: | 379 | Species: | Rattus norvegicus |
Alignment Length: | 393 | Identity: | 198/393 - (50%) |
---|---|---|---|
Similarity: | 247/393 - (62%) | Gaps: | 55/393 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 DDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSY 76
Fly 77 MIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQI 141
Fly 142 VSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQG-----G 201
Fly 202 GG-----GRGGPRAG-----GRGGQ-GDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFG 255
Fly 256 GGQGGGSGGWNQQGGSGGGP-WNNQGGGNGGWNGGGGGGYGGGNSNGSW-GGNGGGGGGGGGFGN 318
Fly 319 EYQQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNKGN-QGGGQGFAGNNYNTGGGGQGGNMGGGN 382
Fly 383 RRY 385 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hrb87F | NP_001163602.1 | RRM1_hnRNPA_like | 25..102 | CDD:241022 | 53/76 (70%) |
RRM_SF | 116..188 | CDD:302621 | 34/71 (48%) | ||
Hnrnpa3 | NP_001104764.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..35 | 5/11 (45%) | |
RRM1_hnRNPA_like | 36..113 | CDD:409992 | 53/76 (70%) | ||
RRM2_hnRNPA3 | 126..205 | CDD:409996 | 39/78 (50%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 204..225 | 7/20 (35%) | |||
HnRNPA1 | 332..>348 | CDD:402981 | 9/28 (32%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 335..379 | 23/67 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 102 | 1.000 | Domainoid score | I6662 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 348 | 1.000 | Inparanoid score | I2227 |
OMA | 1 | 1.010 | - | - | QHG46466 | |
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000779 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8985 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X431 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.980 |