Protein Alignment Hrb87F and Secp43

DIOPT Version :10

• Sequence 1: NP_476806.2
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Alignment Length: 237
• Identity: 54/237 - (22%)
• Similarity: 94/237 - (39%)
• Gaps: 35/237 - (14%)

  Fly    25 KLFIGGLDYRTTDDGLKAHFEKWG-NIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHK 88
            :|::|.|:...|::.:.|.|.|.| :...|.:|::..|....|:.|:.:...   |:|.:|. ||
  Fly     7 QLWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISD---DHALDAM-HK 67

  Fly    89 IDGRTVEPKRAVPRQEIDSPNAGATVK--------KLFVGGLRDDHDEECLREYFKD-FGQIVSV 144
            ::|:.:.....:.|..::|  |..:.|        .::||.|..|.|:..|.:.|.. |..|.:.
  Fly    68 LNGKPIPGTNPIVRFRLNS--ASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTA 130

  Fly   145 NIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTH--SIKNKTLDVKKAIAKQDMDRQGGGGGRGG 207
            .::.| ..|..:|:.|:.|...|.....:.....  .:..|.:.:..|:.|...: .||..|.|.
  Fly   131 KVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKPKSE-LGGAVGEGN 193

  Fly   208 PRAGGRGGQGDRG---------------QGGGGWGGQNRQNG 234
            ...|...|....|               ||...|.|...|.|
  Fly   194 TNYGYGSGMTAAGGTDYSQYYDPTSTYWQGYQAWQGYYEQAG 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_476806.2	RRM1_hnRNPA_like	25..102	CDD:409992	19/77 (25%)
		RRM_SF	116..188	CDD:473069	16/74 (22%)
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	22/88 (25%)
		RRM2_SECp43_like	99..178	CDD:409781	16/79 (20%)
		Trnau1ap	210..330	CDD:465438	6/26 (23%)