Protein Alignment Hrb87F and Secp43

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Alignment Length: 237
• Identity: 54/237 - (22%)
• Similarity: 94/237 - (39%)
• Gaps: 35/237 - (14%)

  Fly    25 KLFIGGLDYRTTDDGLKAHFEKWG-NIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHK 88
            :|::|.|:...|::.:.|.|.|.| :...|.:|::..|....|:.|:.:...   |:|.:|. ||
  Fly     7 QLWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISD---DHALDAM-HK 67

  Fly    89 IDGRTVEPKRAVPRQEIDSPNAGATVK--------KLFVGGLRDDHDEECLREYFKD-FGQIVSV 144
            ::|:.:.....:.|..::|  |..:.|        .::||.|..|.|:..|.:.|.. |..|.:.
  Fly    68 LNGKPIPGTNPIVRFRLNS--ASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTA 130

  Fly   145 NIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTH--SIKNKTLDVKKAIAKQDMDRQGGGGGRGG 207
            .::.| ..|..:|:.|:.|...|.....:.....  .:..|.:.:..|:.|...: .||..|.|.
  Fly   131 KVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKPKSE-LGGAVGEGN 193

  Fly   208 PRAGGRGGQGDRG---------------QGGGGWGGQNRQNG 234
            ...|...|....|               ||...|.|...|.|
  Fly   194 TNYGYGSGMTAAGGTDYSQYYDPTSTYWQGYQAWQGYYEQAG 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	19/77 (25%)
		RRM_SF	116..188	CDD:302621	16/74 (22%)
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:241054	22/88 (25%)
		RRM2_SECp43	99..180	CDD:241056	17/81 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463920
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930