DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb87F and AgaP_AGAP002374

DIOPT Version :9

Sequence 1:NP_001163602.1 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster
Sequence 2:XP_563821.4 Gene:AgaP_AGAP002374 / 3290608 VectorBaseID:AGAP002374 Length:362 Species:Anopheles gambiae


Alignment Length:369 Identity:230/369 - (62%)
Similarity:263/369 - (71%) Gaps:36/369 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEQND-SNGNYDDG----EEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPK 60
            |:|:.| .||::.:|    :||.|||.||||||||||||||||.|||:|||||.:||||||||||
Mosquito     1 MSEKQDPQNGDHQNGRNDDDEIREPEHLRKLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPK 65

  Fly    61 TKRSRGFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDD 125
            |||||||||||||:|||||:||.:||||||||.||||||||||:|:.|.||::||||||||||||
Mosquito    66 TKRSRGFGFITYSKSYMIDDAQASRPHKIDGRVVEPKRAVPRQDINRPEAGSSVKKLFVGGLRDD 130

  Fly   126 HDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKA 190
            .|||.|||||..:|.::|..||:|||.||||||.|:|||||||||||||||:|:|:||.||||||
Mosquito   131 FDEEHLREYFSKYGNVISACIVTDKDNGKKRGFGFVEFDDYDPVDKIILQKSHTIQNKLLDVKKA 195

  Fly   191 IAKQDMDRQGGGGGRGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWG---GAGGGGGFGNSGG 252
            :.||||||.....||.|   ||.||    |.|||.||.| |.:|||.|.   |:||||     ||
Mosquito   196 LPKQDMDRYKNDMGRTG---GGGGG----GGGGGAWGNQ-RGSGGGGWNSQRGSGGGG-----GG 247

  Fly   253 NFGGGQGGGSGGWNQQGGSGGGPWNNQGGGNGG--WNGGGGG---------GYGG-GNSNGSWGG 305
            .:|..:||.:..||..|.:.||.:||.|..|||  ||.|||.         |.|| ||:.|:|||
Mosquito   248 GWGNQRGGAANDWNSGGFNNGGGFNNGGFNNGGNNWNNGGGNPWDNGCGSQGQGGWGNNGGNWGG 312

  Fly   306 NGGGGGGGGG---FGNEYQQSYGGGPQRNSNFGNNRPAPYSQGG 346
            |.||||||.|   |||.|||.|..||.|.....|.|.|||...|
Mosquito   313 NSGGGGGGWGGNEFGNNYQQGYNAGPVRAGGNFNQRAAPYGTDG 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb87FNP_001163602.1 RRM1_hnRNPA_like 25..102 CDD:241022 67/76 (88%)
RRM_SF 116..188 CDD:302621 53/71 (75%)
AgaP_AGAP002374XP_563821.4 RRM1_hnRNPA_like 30..107 CDD:241022 67/76 (88%)
RRM2_hnRNPA_like 121..193 CDD:240774 53/71 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 156 1.000 Domainoid score I8640
eggNOG 1 0.900 - - E33208_3BA81
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 438 1.000 Inparanoid score I3581
OMA 1 1.010 - - QHG46466
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000779
OrthoInspector 1 1.000 - - otm49827
Panther 1 1.100 - - LDO PTHR48027
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X431
TreeFam 1 0.960 - -
1110.930

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