Sequence 1: | NP_001163602.1 | Gene: | Hrb87F / 48535 | FlyBaseID: | FBgn0004237 | Length: | 385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
Alignment Length: | 440 | Identity: | 112/440 - (25%) |
---|---|---|---|
Similarity: | 158/440 - (35%) | Gaps: | 124/440 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAEQNDSNGNYDDGEEIT-------------------EPEQLRK--------LFIGGLDYRTTDD 38
Fly 39 GLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY-SQSYMIDNAQNARPHKIDGRTVEPKR---- 98
Fly 99 -AVPRQEIDSPNAGATVK--KLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAF 160
Fly 161 IEFDDYDPVDKIILQKTHSIK---NKTLDVK------KAIAKQDMDRQGG--GGGRGGPRAGGRG 214
Fly 215 GQGDRGQGGGGWGGQNRQN-----------------------------GGGNWGGAGGGGGFGNS 250
Fly 251 GGNFGGGQGGGSGGWNQQGGSGGGPWNNQG-GGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGG 314
Fly 315 GFGNEYQQSYGG--------------------------GPQRNSNFGNNR 338 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hrb87F | NP_001163602.1 | RRM1_hnRNPA_like | 25..102 | CDD:241022 | 27/90 (30%) |
RRM_SF | 116..188 | CDD:302621 | 19/74 (26%) | ||
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | 28/92 (30%) |
RRM_SF | 179..257 | CDD:302621 | 20/77 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |