Protein Alignment Hrb87F and Rbm34

DIOPT Version :10

• Sequence 1: NP_476806.2
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001014037.1
• Gene: Rbm34 / 307956
• RGDID: 1310161
• Length: 428
• Species: Rattus norvegicus
• Alignment Length: 251
• Identity: 55/251 - (21%)
• Similarity: 93/251 - (37%)
• Gaps: 77/251 - (30%)

  Fly     4 QNDSNGNYDDGEEI-------------------TEPEQL---RKLFIGGLDYRTTDDGLKAHFEK 46
            ::.|.|...|||.:                   .|.|:|   |.:|:|.|........||:.|::
  Rat   141 RSQSRGKVTDGEALDVALSLNEDGRQRTKVPLNPEEERLKNERTVFVGNLPVTCNKKKLKSFFKE 205

  Fly    47 WGNIVDV---------------------------------VVMKDPKTKRSRGFGFITYSQSYMI 78
            :|.:..|                                 ||.|:.:..          :::...
  Rat   206 YGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKSINAYVVFKEERAA----------AKALQR 260

  Fly    79 DNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVS 143
            :.||.|...:|            |.::.|..|....:.:|||.|....||..|.|:|.|.|.||:
  Rat   261 NGAQIAEGFRI------------RVDLASETASRDKRSVFVGNLPYRVDESALEEHFLDCGSIVA 313

  Fly   144 VNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQ 199
            |.||.:..||..|||.::.|::.|.|...:......:..:.|.|.:::.|:.:.:|
  Rat   314 VRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVMRSVNKEKLKQQ 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_476806.2	RRM1_hnRNPA_like	25..102	CDD:409992	15/109 (14%)
		RRM_SF	116..188	CDD:473069	25/71 (35%)
Rbm34	NP_001014037.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..106
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	127..152		3/10 (30%)
		RRM1_RBM34	183..274	CDD:409828	17/112 (15%)
		RRM2_RBM34	286..358	CDD:409829	25/71 (35%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	361..428		2/9 (22%)