DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hrb87F and Pabpn1l

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	NP_001107251.1	Gene:	Pabpn1l / 307920	RGDID:	1562761	Length:	269	Species:	Rattus norvegicus

Alignment Length:	168	Identity:	39/168 - (23%)
Similarity:	62/168 - (36%)	Gaps:	36/168 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    86 PHKIDGRTVEPKRAVPRQEIDSP-------------NAGATVKKLFVGGLRDDHDEECLREYFKD 137
            |..:..:..|.:||..| |:.||             |..|..:.::||.:........|..||..
  Rat    98 PPSVQRKATEEERAEAR-ELLSPETIGCFFPGAPKENVEADHRSVYVGNVDYGGSAAELEAYFSP 161

  Fly   138 FGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQ-------D 195
            .|:|..|.|:.||.:|..:|:|:|||.....|...:.....:.:.:.:   |.:.|:       .
  Rat   162 CGEIHRVTILCDKFSGHPKGYAYIEFASKSSVQAAVRLDESTFRGRVI---KVLPKRTNFPGISS 223

  Fly   196 MDRQG------------GGGGRGGPRAGGRGGQGDRGQ 221
            .||.|            .|..:..||....|....||:
  Rat   224 TDRGGLRTHSSSRAAFLQGSLQRKPRLRPHGQSRGRGR 261

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	4/15 (27%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	18/71 (25%)
Pabpn1l	NP_001107251.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	26..54
		RRM	<129..>223	CDD:223796	22/96 (23%)
		RRM_SF	140..216	CDD:302621	20/78 (26%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	240..269		6/22 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910