DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hrb87F and elavl1b

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	NP_570984.2	Gene:	elavl1b / 30065	ZFINID:	ZDB-GENE-000210-17	Length:	360	Species:	Danio rerio

Alignment Length:	174	Identity:	41/174 - (23%)
Similarity:	78/174 - (44%)	Gaps:	11/174 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 EQNDSNGNYDD--GEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSR 65
            |..|....|:|  |:|.::.:  ..|.|..|....:.:.|::.|...|.:....:::|.....|.
Zfish    35 EVYDMPNGYEDPMGDEPSDAK--TNLIINYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGHSL 97

  Fly    66 GFGFITYSQSYMIDNAQNA-RPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEE 129
            |:||:.|......:.|.|. ...::..:|::...|.|..:      |.....|::.||.....::
Zfish    98 GYGFVNYVNPSDAERAINTLNGLRLQSKTIKVSYARPSSD------GIKDANLYISGLPKTMTQK 156

  Fly   130 CLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKII 173
            .:.:.|..:|:|::..|:.|:.:|..||.|||.||.....::.|
Zfish   157 NVEDMFTQYGRIINSRILVDQASGLSRGVAFIRFDKRSEAEEAI 200

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	16/77 (21%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	17/58 (29%)
elavl1b	NP_570984.2	ELAV_HUD_SF	53..360	CDD:273741	35/156 (22%)
		RRM1_Hu	55..132	CDD:241094	15/78 (19%)
		RRM_SF	142..225	CDD:302621	17/59 (29%)
		RRM_SF	277..360	CDD:302621
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910