Sequence 1: | NP_001163602.1 | Gene: | Hrb87F / 48535 | FlyBaseID: | FBgn0004237 | Length: | 385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006242446.1 | Gene: | Hnrnpa1 / 29578 | RGDID: | 69234 | Length: | 373 | Species: | Rattus norvegicus |
Alignment Length: | 392 | Identity: | 195/392 - (49%) |
---|---|---|---|
Similarity: | 246/392 - (62%) | Gaps: | 47/392 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 EEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMID 79
Fly 80 NAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSV 144
Fly 145 NIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM-----DRQG--GG 202
Fly 203 GGRGGPRAGGRGGQGDRGQGG-----GGWGGQNRQNGGGNWGGAGGG-GGFGNSGGNFGGGQG-- 259
Fly 260 GGSGGWNQQGGSGGGPWNNQGGGNGGW-------NGGGGGGYGGGNSNGSWGGNGGGGGGGGGFG 317
Fly 318 NEYQQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNK-GNQGGGQGFAGNNYNTGGGGQGGNMGGG 381
Fly 382 NR 383 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hrb87F | NP_001163602.1 | RRM1_hnRNPA_like | 25..102 | CDD:241022 | 51/76 (67%) |
RRM_SF | 116..188 | CDD:302621 | 34/71 (48%) | ||
Hnrnpa1 | XP_006242446.1 | RRM1_hnRNPA1 | 12..92 | CDD:410154 | 54/79 (68%) |
RRM2_hnRNPA3 | 105..184 | CDD:409996 | 38/78 (49%) | ||
HnRNPA1 | 308..345 | CDD:402981 | 17/38 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 102 | 1.000 | Domainoid score | I6662 |
eggNOG | 1 | 0.900 | - | - | E33208_3BA81 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 348 | 1.000 | Inparanoid score | I2227 |
OMA | 1 | 1.010 | - | - | QHG46466 | |
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000779 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8985 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103644 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X431 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.780 |