DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb87F and DAZAP1

DIOPT Version :9

Sequence 1:NP_001163602.1 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster
Sequence 2:XP_011526206.1 Gene:DAZAP1 / 26528 HGNCID:2683 Length:550 Species:Homo sapiens


Alignment Length:418 Identity:122/418 - (29%)
Similarity:164/418 - (39%) Gaps:104/418 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHK 88
            ||||:||||:.||.:.|:::|.::|.:||.|:|||..|.:||||||:.:.....:.....:|||.
Human   153 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHT 217

  Fly    89 IDGRTVEPKRAVPR---QEIDSPNAG---------ATVKKLFVGGLRDDHDEECLREYFKDFGQI 141
            :|||.::||...||   .|...|..|         :...|:||||:..:..|..||||||.||.:
Human   218 LDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVV 282

  Fly   142 VSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGG--GGG 204
            ..|.::.|.:..:.|||.||.|:|...||:.:....|.|..|.::||:|..:....:..|  |..
Human   283 TEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 347

  Fly   205 RGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGG-GGFG-------------------- 248
            :.|.|.......|..||....|  |......|.|..||.. ||:|                    
Human   348 QWGSRVVPNAANGWAGQPPPTW--QQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIV 410

  Fly   249 -NSGGNFGGGQGGGSG-GWNQQGGSGGGP------------------------------------ 275
             ...|.|...||...| |...|...|.||                                    
Human   411 STPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAP 475

  Fly   276 -WNNQGGGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQ--SYGGGPQRNSNFGNN 337
             .:........:..|...|||...|           |.|.||.:..||  ||||           
Human   476 DMSKPPTAQPDFPYGQYAGYGQDLS-----------GFGQGFSDPSQQPPSYGG----------- 518

  Fly   338 RPAPYSQGG---GGGGFNKGNQGGGQGF 362
             |:....||   ||.||.:|.....|||
Human   519 -PSVPGSGGPPAGGSGFGRGQNHNVQGF 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb87FNP_001163602.1 RRM1_hnRNPA_like 25..102 CDD:241022 33/76 (43%)
RRM_SF 116..188 CDD:302621 28/71 (39%)
DAZAP1XP_011526206.1 RRM <151..341 CDD:223796 70/187 (37%)
RRM1_DAZAP1 154..235 CDD:241018 35/80 (44%)
RRM2_DAZAP1 254..333 CDD:240773 31/78 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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