DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb87F and DAZAP1

DIOPT Version :10

Sequence 1:NP_476806.2 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster
Sequence 2:XP_011526206.1 Gene:DAZAP1 / 26528 HGNCID:2683 Length:550 Species:Homo sapiens


Alignment Length:418 Identity:122/418 - (29%)
Similarity:164/418 - (39%) Gaps:104/418 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHK 88
            ||||:||||:.||.:.|:::|.::|.:||.|:|||..|.:||||||:.:.....:.....:|||.
Human   153 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHT 217

  Fly    89 IDGRTVEPKRAVPR---QEIDSPNAG---------ATVKKLFVGGLRDDHDEECLREYFKDFGQI 141
            :|||.::||...||   .|...|..|         :...|:||||:..:..|..||||||.||.:
Human   218 LDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVV 282

  Fly   142 VSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGG--GGG 204
            ..|.::.|.:..:.|||.||.|:|...||:.:....|.|..|.::||:|..:....:..|  |..
Human   283 TEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 347

  Fly   205 RGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGG-GGFG-------------------- 248
            :.|.|.......|..||....|  |......|.|..||.. ||:|                    
Human   348 QWGSRVVPNAANGWAGQPPPTW--QQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIV 410

  Fly   249 -NSGGNFGGGQGGGSG-GWNQQGGSGGGP------------------------------------ 275
             ...|.|...||...| |...|...|.||                                    
Human   411 STPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAP 475

  Fly   276 -WNNQGGGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQ--SYGGGPQRNSNFGNN 337
             .:........:..|...|||...|           |.|.||.:..||  ||||           
Human   476 DMSKPPTAQPDFPYGQYAGYGQDLS-----------GFGQGFSDPSQQPPSYGG----------- 518

  Fly   338 RPAPYSQGG---GGGGFNKGNQGGGQGF 362
             |:....||   ||.||.:|.....|||
Human   519 -PSVPGSGGPPAGGSGFGRGQNHNVQGF 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb87FNP_476806.2 RRM1_hnRNPA_like 25..102 CDD:409992 33/76 (43%)
RRM_SF 116..188 CDD:473069 28/71 (39%)
DAZAP1XP_011526206.1 ELAV_HUD_SF <106..199 CDD:273741 25/45 (56%)
RRM1_DAZAP1 154..235 CDD:409988 35/80 (44%)
RRM2_DAZAP1 254..333 CDD:409765 31/78 (40%)

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