DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hrb87F and SPBC1861.04c

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	NP_596721.1	Gene:	SPBC1861.04c / 2539617	PomBaseID:	SPBC1861.04c	Length:	1014	Species:	Schizosaccharomyces pombe

Alignment Length:	193	Identity:	38/193 - (19%)
Similarity:	80/193 - (41%)	Gaps:	37/193 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    24 RKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHK 88
            |:|::..:|::..:..::..|..:|.:..|.:.|  :..:.:|||::..:.:...:||.:|...:
pombe   757 RELYVTNIDFKVNEKDVETFFRDYGQVESVRIPK--RFNQHKGFGYVVMTTNQDAENALSAAGKQ 819

  Fly    89 IDGRTVEPKRAVPRQEID----SPNAGATVKKLF------------------------VGGLRDD 125
            :..|.:....:.||:.::    |.|...|:.|.|                        |..:...
pombe   820 LGNRVLNVVLSKPRESLEKTRVSSNDNRTLAKSFETTESNKMSTPKKSFEQIKSKSLGVTNVDGT 884

  Fly   126 HDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQ-KTHSIKNKTLDV 187
            .:|..||..|:.:|::..| ::..:..|     |.:||.|.....|..|. :.|.|..:.|.:
pombe   885 VNEARLRSLFESYGKLYRV-VLHPEHEG-----AVVEFLDIHDAGKASLALEGHEIGGRLLHI 941

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	13/76 (17%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	19/97 (20%)
SPBC1861.04c	NP_596721.1	RRM1_Prp24	590..662	CDD:240742
		RRM2_Prp24	666..743	CDD:240743
		RRM3_Prp24	757..829	CDD:240744	14/73 (19%)
		RRM4_Prp24	874..943	CDD:240745	17/74 (23%)
		Lsm_interact	996..1014	CDD:283133
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910