| Sequence 1: | NP_001163602.1 | Gene: | Hrb87F / 48535 | FlyBaseID: | FBgn0004237 | Length: | 385 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_056050.1 | Gene: | CSTF2T / 23283 | HGNCID: | 17086 | Length: | 616 | Species: | Homo sapiens |
| Alignment Length: | 557 | Identity: | 116/557 - (20%) |
|---|---|---|---|
| Similarity: | 174/557 - (31%) | Gaps: | 212/557 - (38%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 23 LRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY-SQSYMIDNAQNARP 86
Fly 87 HKIDGRTVEPKRAVPRQE-------------IDSP--------NAGATVKKLFVGGLRDDHDEE- 129
Fly 130 ------CLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFD------DYDPVDKIILQKTHSI-- 180
Fly 181 ---KNKTLDVK-----------------------KAIAKQDMDR--------------QGG---- 201
Fly 202 --------GGGRGGPRAG-------GRGGQG----DRGQ-----------------GG----GGW 226
Fly 227 G-GQNRQNGG------------GNWGGAGGGGGFGNSGGNFGGG------QGGGSGGWNQQGGSG 272
Fly 273 GGPWNNQGG----GNGGWNGGG-----------------------------GGGYGGGNSNG--- 301
Fly 302 ------SWGGNGGGGGGGG----GFGNEYQQSYGGGPQR---NSNFGNNRPAPYSQGGG--GGGF 351
Fly 352 -NKGNQGGGQ---GFAGNNYNTGGGGQGGNMGGGNRR 384 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Hrb87F | NP_001163602.1 | RRM1_hnRNPA_like | 25..102 | CDD:241022 | 20/77 (26%) |
| RRM_SF | 116..188 | CDD:302621 | 12/89 (13%) | ||
| CSTF2T | NP_056050.1 | RRM | <16..>109 | CDD:223796 | 21/92 (23%) |
| RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 19/73 (26%) | ||
| CSTF2_hinge | 113..191 | CDD:291025 | 11/86 (13%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 203..241 | 3/37 (8%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 262..418 | 33/155 (21%) | |||
| 9 X 5 AA tandem repeats of M-E-T-R-[AG] | 418..462 | 3/43 (7%) | |||
| 9 X 5 AA tandem repeats of G-[AT]-G-[MI]-Q | 505..549 | 18/44 (41%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 542..573 | 5/13 (38%) | |||
| CSTF_C | 572..612 | CDD:291002 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||