DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb87F and HNRNPA3

DIOPT Version :9

Sequence 1:NP_001163602.1 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001317178.1 Gene:HNRNPA3 / 220988 HGNCID:24941 Length:378 Species:Homo sapiens


Alignment Length:393 Identity:197/393 - (50%)
Similarity:246/393 - (62%) Gaps:56/393 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSY 76
            ::|.:..|||||||||||||.:.||||.|:.||||||.:.|.|||:||:|||||||||:|||...
Human    23 EEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87

  Fly    77 MIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQI 141
            .:|.|..|||||:|||.|||||||.|::...|.|..||||:||||:::|.:|..||:||:.:|:|
Human    88 EVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKI 152

  Fly   142 VSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQG-----G 201
            .::.::.|:.:||||||||:.|||:|.||||::||.|:|.....:||||::||:|...|     |
Human   153 ETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRG 217

  Fly   202 GG-----GRGGPRAG-----GRGGQ-GDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFG 255
            ||     ||||...|     ||||. |.||..|||.||.....|||:    ||..|||..|||:|
Human   218 GGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGD----GGYNGFGGDGGNYG 278

  Fly   256 GGQGGGSGGWNQQGGSGGGP-WNNQGGGNGGWNGGGGGGYGGGNSNGSW-GGNGGGGGGGGGFGN 318
            ||.|..|.|    |..|||| :.|||||.     ||||||.|.|..|:: |||.||||....|||
Human   279 GGPGYSSRG----GYGGGGPGYGNQGGGY-----GGGGGYDGYNEGGNFGGGNYGGGGNYNDFGN 334

  Fly   319 EYQQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNKGN-QGGGQGFAGNNYNTGGGGQGGNMGGGN 382
                 |.|  |:.||:|.      .:||..||.:.|: .|||.|        .|||.||.   |:
Human   335 -----YSG--QQQSNYGP------MKGGSFGGRSSGSPYGGGYG--------SGGGSGGY---GS 375

  Fly   383 RRY 385
            ||:
Human   376 RRF 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb87FNP_001163602.1 RRM1_hnRNPA_like 25..102 CDD:241022 53/76 (70%)
RRM_SF 116..188 CDD:302621 34/71 (48%)
HNRNPA3NP_001317178.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35 5/11 (45%)
RRM1_hnRNPA_like 36..113 CDD:409992 53/76 (70%)
RRM2_hnRNPA3 126..205 CDD:409996 39/78 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..225 7/20 (35%)
HnRNPA1 331..>347 CDD:402981 9/28 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..378 21/60 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6828
eggNOG 1 0.900 - - E33208_3BA81
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 360 1.000 Inparanoid score I2209
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46466
OrthoDB 1 1.010 - - D1202220at2759
OrthoFinder 1 1.000 - - FOG0000779
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X431
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
98.880

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