Protein Alignment Hrb87F and rnp-9

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001359585.1
• Gene: rnp-9 / 182350
• WormBaseID: WBGene00007396
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 195
• Identity: 45/195 - (23%)
• Similarity: 89/195 - (45%)
• Gaps: 47/195 - (24%)

  Fly    26 LFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID 90
            :|:|.|....:::.||:.|.|:|.:.:..|::|.:|::|:|:||:::...   .||:||.. .::
 Worm    89 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNK---QNAENAIA-GMN 149

  Fly    91 GRTVEPKRAVP------------------RQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKD 137
            |:.: .||||.                  .|..:|..|..|  .::||.:.....:..||:.|..
 Worm   150 GKWI-GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNT--SVYVGNISQQTTDADLRDLFST 211

  Fly   138 FGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQ----------------KTHSIKNKTLD 186
            :|.|..|.|.      |.:.:||:.::..:...|.|::                :|.::.|:.|:
 Worm   212 YGDIAEVRIF------KTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVRCSWGRTQAVPNQALN 270

  Fly   187  186
             Worm   271  270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	24/93 (26%)
		RRM_SF	116..188	CDD:302621	17/87 (20%)
rnp-9	NP_001359585.1	RRM2_TIA1_like	88..162	CDD:240799	24/77 (31%)
		RRM3_TIA1_like	189..260	CDD:240800	15/78 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910