Protein Alignment Hrb87F and pab-2

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001379081.1
• Gene: pab-2 / 181473
• WormBaseID: WBGene00003903
• Length: 692
• Species: Caenorhabditis elegans
• Alignment Length: 394
• Identity: 91/394 - (23%)
• Similarity: 137/394 - (34%)
• Gaps: 89/394 - (22%)

  Fly    21 EQLRKLFIGGLDYRTT----------DDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQS 75
            :::::|...||.|...          .:.|.|.|.|:|.|...|||.|.:.| .:||||:.::..
 Worm   225 QRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGK-PKGFGFVAFADQ 288

  Fly    76 YMIDNAQNA-------------------RPHKIDGRTVEPKRAVP--RQEIDSPNAGATVKKLFV 119
               |.|..|                   |..|...|:.|.||...  :||......|.   .|:|
 Worm   289 ---DAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGV---NLYV 347

  Fly   120 GGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKT 184
            ..:.:|.:::.||::|..||.|.|..::.| :.|:.:||.|:.|:..:.....:.    .:.:|.
 Worm   348 KNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVT----DMNSKM 407

  Fly   185 LDVKK---AIAKQDMDRQGGGGG---------RGGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGG 236
            :..|.   |:|::..||:.....         |.|.:|.|........| |..|:...|..|
 Worm   408 IGAKPLYVALAQRKEDRRAQLASQYMQRLATLRMGQQASGVPAMTQLYQPGQQGYFVPNPMN--- 469

  Fly   237 NWGGAGGGGGFGNSGGNFGGGQG--------------GGSGGWNQQGG------SGGGPWNNQGG 281
                |.|..||........|..|              .....:.||.|      :.|.|......
 Worm   470 ----AQGRPGFQPQSAQIRGPPGQRVFQNQMFMQYPFNQRQVYPQQQGRPPMRTNDGRPQYGMAP 530

  Fly   282 GNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGF--GNEYQQSYGGGPQRNSNFGNNRPAPYSQ 344
            ...|....||.|...|.:.....|....|.....|  |...||.    ||::|.....:|....|
 Worm   531 RPAGAPRVGGPGVQMGGAPIRQQGPAPRGAPQKPFYQGPPRQQQ----PQQHSQQPAQQPGQQGQ 591

  Fly   345 GGGG 348
            |..|
 Worm   592 GQSG 595

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	28/107 (26%)
		RRM_SF	116..188	CDD:302621	17/71 (24%)
pab-2	NP_001379081.1	PABP-1234	57..675	CDD:130689	91/394 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910